RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KCNB2Q92953 911 aa4.34□□□□□ -1.71
CHD9-204ENST00000561869 EMILIN2Q9BXX0 1053 aa4.34□□□□□ -1.71
CHD9-204ENST00000561869 FAM170BA6NMN3 283 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 NEFMP07197 916 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 EIF4BP23588 611 aaKnown RBP4.33□□□□□ -1.72
CHD9-204ENST00000561869 DAB2P98082 770 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 TAGLNQ01995 201 aaKnown RBP4.33□□□□□ -1.72
CHD9-204ENST00000561869 MAP7Q14244 749 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 INTS5Q6P9B9 1019 aaKnown RBP4.33□□□□□ -1.72
CHD9-204ENST00000561869 SV2BQ7L1I2 683 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 FBXL6Q8N531 539 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 YIPF2Q9BWQ6 316 aa4.33□□□□□ -1.72
CHD9-204ENST00000561869 TRIM37O94972 964 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 NTF4P34130 210 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 TXKP42681 527 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 PTPN11Q06124 597 aaPredicted RBP4.32□□□□□ -1.72
CHD9-204ENST00000561869 RING1Q06587 406 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 TTLL4Q14679 1199 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 PCNX4Q63HM2 1172 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 SCARA3Q6AZY7 606 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 NFXL1Q6ZNB6 911 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 TBC1D32Q96NH3 1257 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 ATXN3LQ9H3M9 355 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 PIM2Q9P1W9 311 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 PARP2Q9UGN5 583 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 ADGRE2Q9UHX3 823 aa4.32□□□□□ -1.72
CHD9-204ENST00000561869 CTSHP09668 335 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 GRIK1P39086 918 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 ERVK-24P63145 666 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 FGD1P98174 961 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 CPSF6Q16630 551 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD9-204ENST00000561869 MSMPQ1L6U9 139 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 CCDC27Q2M243 656 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 LLGL2Q6P1M3 1020 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 TMC4Q7Z404 712 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 SMYD4Q8IYR2 804 aaPredicted RBP4.31□□□□□ -1.72
CHD9-204ENST00000561869 RNF214Q8ND24 703 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 LGR6Q9HBX8 967 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 CBX8Q9HC52 389 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 ATG3Q9NT62 314 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 CYP8B1Q9UNU6 501 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 DAGLAQ9Y4D2 1042 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 SAMM50Q9Y512 469 aa4.31□□□□□ -1.72
CHD9-204ENST00000561869 WNT11O96014 354 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 HCLS1P14317 486 aaPredicted RBP4.3□□□□□ -1.72
CHD9-204ENST00000561869 FOSL1P15407 271 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 INPP5AQ14642 412 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 LRRC14Q15048 493 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 MEI1Q5TIA1 1274 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 OGFOD3Q6PK18 319 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 ZNF765Q7L2R6 523 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 ABI1Q8IZP0 508 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 GIMAP7Q8NHV1 300 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 GAL3ST3Q96A11 431 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 ISL2Q96A47 359 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 FAM161BQ96MY7 647 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 OSBPL1AQ9BXW6 950 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 TTF2Q9UNY4 1162 aaKnown RBP4.3□□□□□ -1.72
CHD9-204ENST00000561869 LEMD3Q9Y2U8 911 aa4.3□□□□□ -1.72
CHD9-204ENST00000561869 RNGTTO60942 597 aaKnown RBP4.29□□□□□ -1.72
CHD9-204ENST00000561869 ERCC3P19447 782 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 CDK5R2Q13319 367 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 PPM1JQ5JR12 505 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 UBE3DQ7Z6J8 389 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 C12orf40Q86WS4 652 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 METTL22Q9BUU2 404 aaPredicted RBP4.29□□□□□ -1.72
CHD9-204ENST00000561869 PIDD1Q9HB75 910 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 PCOLCE2Q9UKZ9 415 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 CSADQ9Y600 493 aa4.29□□□□□ -1.72
CHD9-204ENST00000561869 USP31Q70CQ4 1352 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 DCDC2CA8MYV0 355 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 CYP26A1O43174 497 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 LEFTY1O75610 366 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 PRNPP04156 253 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 CDK8P49336 464 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 ST13P50502 369 aaKnown RBP4.28□□□□□ -1.72
CHD9-204ENST00000561869 RPS26P62854 115 aaKnown RBP4.28□□□□□ -1.72
CHD9-204ENST00000561869 HNRNPUQ00839 825 aaKnown RBP eCLIP4.28□□□□□ -1.72
CHD9-204ENST00000561869 PSMD2Q13200 908 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 CCDC85BQ15834 202 aaPredicted RBP4.28□□□□□ -1.72
CHD9-204ENST00000561869 ZBTB37Q5TC79 503 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 LRFN4Q6PJG9 635 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.28□□□□□ -1.72
CHD9-204ENST00000561869 AGMOQ6ZNB7 445 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 CYFIP1Q7L576 1253 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 ACSBG1Q96GR2 724 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 ZC3H7BQ9UGR2 993 aaKnown RBP4.28□□□□□ -1.72
CHD9-204ENST00000561869 PCDHB5Q9Y5E4 795 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 U3KQE9 123 aa4.28□□□□□ -1.72
CHD9-204ENST00000561869 FANCGO15287 622 aa4.27□□□□□ -1.73
CHD9-204ENST00000561869 FAM87AP0C7U9 286 aa4.27□□□□□ -1.73
CHD9-204ENST00000561869 LIG3P49916 1009 aa4.27□□□□□ -1.73
CHD9-204ENST00000561869 XPCQ01831 940 aaPredicted RBP4.27□□□□□ -1.73
CHD9-204ENST00000561869 CYP27A1Q02318 531 aa4.27□□□□□ -1.73
CHD9-204ENST00000561869 TAF1CQ15572 869 aaPredicted RBP4.27□□□□□ -1.73
CHD9-204ENST00000561869 DUSP27Q5VZP5 1158 aa4.27□□□□□ -1.73
CHD9-204ENST00000561869 FAM214BQ7L5A3 538 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms