RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 GAKO14976 1311 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 USP2O75604 605 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 IGHDP01880 384 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 PLCG2P16885 1265 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 RGS3P49796 1198 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 SLC9C2Q5TAH2 1124 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 TEX11Q8IYF3 940 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 EDC3Q96F86 508 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 DCBLD2Q96PD2 775 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
SNRPA1-214ENST00000560987 ECM29Q5VYK3 1845 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 ERC2O15083 957 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 NFIAQ12857 509 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 NOGQ13253 232 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 DCAF15Q66K64 600 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 SH3RF3Q8TEJ3 882 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 TGFBRAP1Q8WUH2 860 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 HAUS7Q99871 368 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
SNRPA1-214ENST00000560987 POTEMA6NI47 508 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 IGSF3O75054 1194 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 ENTPD3O75355 529 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 MAP4K4O95819 1239 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 USP5P45974 858 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 DYNLL1P63167 89 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 KIF23Q02241 960 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 TSHZ3Q63HK5 1081 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 CDAN1Q8IWY9 1227 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 ANKRD13AQ8IZ07 590 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 MIGA1Q8NAN2 632 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 IDI2Q9BXS1 227 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 LNPKQ9C0E8 428 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 CSADQ9Y600 493 aa10.93□□□□□ -0.66
SNRPA1-214ENST00000560987 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 RHBDL3P58872 404 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 PPP4CP60510 307 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 LDLRAD1Q5T700 205 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 ZSCAN25Q6NSZ9 544 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 MAPKAPK5Q8IW41 473 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 CSRNP1Q96S65 589 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
SNRPA1-214ENST00000560987 ZNF532Q9HCE3 1301 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 FAM155AB1AL88 458 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 WDHD1O75717 1129 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 SLC10A3P09131 477 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 PDE6AP16499 860 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 MX1P20591 662 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 RASAL3Q86YV0 1011 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 CERS3Q8IU89 383 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 WRNIP1Q96S55 665 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 ZIC5Q96T25 663 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 TRIM34Q9BYJ4 488 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 ELP3Q9H9T3 547 aa10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 SAP30BPQ9UHR5 308 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-214ENST00000560987 TTC41PQ6P2S7 1318 aa10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 NEFLP07196 543 aa10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 SLC4A8Q2Y0W8 1093 aa10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 TMED8Q6PL24 325 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 CHD1LQ86WJ1 897 aa10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 CRNKL1Q9BZJ0 848 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-214ENST00000560987 UNCXA6NJT0 531 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 ADD2P35612 726 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 SMC5Q8IY18 1101 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 OSBPL5Q9H0X9 879 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 DHX36Q9H2U1 1008 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 PALD1Q9ULE6 856 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 PAPPA2Q9BXP8 1791 aa10.89□□□□□ -0.67
SNRPA1-214ENST00000560987 RNF113AO15541 343 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-214ENST00000560987 TRPA1O75762 1119 aa10.88□□□□□ -0.67
SNRPA1-214ENST00000560987 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms