RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ZNF594Q96JF6 807 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 PDCL3Q9H2J4 239 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 TGFBR3LH3BV60 316 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 PDGFRBP09619 1106 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 NOS3P29474 1203 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 TDO2P48775 406 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 CLDN10P78369 228 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 AMPD3Q01432 767 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 ECM1Q16610 540 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 RTN1Q16799 776 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 MAP9Q49MG5 647 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 PRR23CQ6ZRP0 262 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 HINFPQ9BQA5 517 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 C2orf49Q9BVC5 232 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 CXorf56Q9H5V9 222 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 ANO2Q9NQ90 1003 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 NAGPAQ9UK23 515 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 ASAP1Q9ULH1 1129 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 ISY1Q9ULR0 285 aaKnown RBP5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 KIAA1024Q9UPX6 916 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 DCAF1Q9Y4B6 1507 aa5.43□□□□□ -1.54
HMGB3P26-201ENST00000560051 H3BRB1 525 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 KIF20AO95235 890 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 MAP3K6O95382 1288 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 TPM2P07951 284 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCDC159P0C7I6 412 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 KCNA2P16389 499 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 TRAPPC10P48553 1259 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 IRAK1P51617 712 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 EIF5P55010 431 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZNF211Q13398 564 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 CRTC2Q53ET0 693 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM133BQ5BKY9 247 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 IQCEQ6IPM2 695 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 DHX32Q7L7V1 743 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 SMAP1Q8IYB5 467 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 SIX5Q8N196 739 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 TTC30BQ8N4P2 665 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 CHCHD4Q8N4Q1 142 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 MIGA1Q8NAN2 632 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 RNF34Q969K3 372 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 MAP7D2Q96T17 732 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 APBA2Q99767 749 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 SEZ6LQ9BYH1 1024 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZNF700Q9H0M5 742 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 TUT1Q9H6E5 874 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 AKTIPQ9H8T0 292 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 DCTN4Q9UJW0 460 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 FBXO2Q9UK22 296 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 TTF2Q9UNY4 1162 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZNF652Q9Y2D9 606 aa5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 THRAP3Q9Y2W1 955 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZCCHC6Q5VYS8 1495 aaKnown RBP5.42□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM170AA1A519 330 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L15C9J2P7 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L10C9JJH3 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L13C9JLJ4 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L12C9JPN9 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L11C9JVI0 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L21D6R901 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L18D6R9N7 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L22D6RA61 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L17D6RBQ6 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L19D6RCP7 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L20D6RJB6 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ENPP3O14638 875 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 GSC2O15499 205 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 KIF5CO60282 957 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ICMTO60725 284 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 COBLO75128 1261 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 COQ9O75208 318 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 MTA2O94776 668 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ABL1P00519 1130 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 KRT18P05783 430 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 P4HBP07237 508 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 RARAP10276 462 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 XRCC5P13010 732 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 RPL17P18621 184 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 RASA1P20936 1047 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 SSTR4P31391 388 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 CLK1P49759 484 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 SEC13P55735 322 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L24Q0WX57 530 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 PPP2R5AQ15172 486 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ODR4Q5SWX8 454 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 TTC39BQ5VTQ0 682 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 LARP1BQ659C4 914 aaKnown RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 KRT25Q7Z3Z0 450 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZSCAN29Q8IWY8 852 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 CHPFQ8IZ52 775 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 NDUFAF2Q8N183 169 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 TTC9Q92623 222 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM161BQ96MY7 647 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 NEUROD6Q96NK8 337 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 LPIN3Q9BQK8 851 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 POLR3CQ9BUI4 534 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 MRPL18Q9H0U6 180 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms