RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CXCL11O14625 94 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 ID4P47928 161 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 SLC39A5Q6ZMH5 540 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 FASTKD5Q7L8L6 764 aaKnown RBP12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 GJD3Q8N144 294 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 MINPP1Q9UNW1 487 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
PPP1R3E-204ENST00000559942 INPP5BP32019 993 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 FAM110CQ1W6H9 321 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 DCAF15Q66K64 600 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 MFSD14AQ96MC6 490 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 SLC45A1Q9Y2W3 748 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 DCHS1Q96JQ0 3298 aa12.19□□□□□ -0.46
PPP1R3E-204ENST00000559942 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 FPGSQ05932 587 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 PRSS33Q8NF86 280 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 HLA-CQ95604 372 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 ACACBO00763 2458 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 PLXNB2O15031 1838 aa12.18□□□□□ -0.46
PPP1R3E-204ENST00000559942 DNM1LO00429 736 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 RAB30Q15771 203 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 HFE2Q6ZVN8 426 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 TACC3Q9Y6A5 838 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
PPP1R3E-204ENST00000559942 FASNP49327 2511 aaKnown RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 XRCC5P13010 732 aaKnown RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 KLRK1P26718 216 aa12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 FKBP1AP62942 108 aaKnown RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 DZIP1LQ8IYY4 767 aaKnown RBP12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 CNTNAP3BQ96NU0 1288 aa12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 CNTNAP3Q9BZ76 1288 aa12.16□□□□□ -0.46
PPP1R3E-204ENST00000559942 A0A0G2JLL6 359 aaPredicted RBP12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 DCXO43602 365 aa12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 RAG1P15918 1043 aa12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 PRRT2Q7Z6L0 340 aaPredicted RBP12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 LPAR1Q92633 364 aa12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 NKX2-4Q9H2Z4 354 aa12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 SPEF2Q9C093 1822 aa12.15□□□□□ -0.46
PPP1R3E-204ENST00000559942 NCOR2Q9Y618 2525 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 SNX17Q15036 470 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 FAM178BQ8IXR5 827 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 PRRX2Q99811 253 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.14□□□□□ -0.471e-12■□□□□ 11.1
PPP1R3E-204ENST00000559942 SERPINA10Q9UK55 444 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 GBF1Q92538 1859 aa12.14□□□□□ -0.47
PPP1R3E-204ENST00000559942 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
PPP1R3E-204ENST00000559942 PDE8AO60658 829 aa12.13□□□□□ -0.47
PPP1R3E-204ENST00000559942 NEFMP07197 916 aa12.13□□□□□ -0.47
PPP1R3E-204ENST00000559942 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
PPP1R3E-204ENST00000559942 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
PPP1R3E-204ENST00000559942 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 MSCO60682 206 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 POU3F3P20264 500 aaPredicted RBP12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 TLE2Q04725 743 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 TCF15Q12870 199 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 IER5LQ5T953 404 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 ZNF112Q9UJU3 913 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
PPP1R3E-204ENST00000559942 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 PTPRFP10586 1907 aa12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 CLTBP09497 229 aa12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 CACNB3P54284 484 aa12.11□□□□□ -0.47
PPP1R3E-204ENST00000559942 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms