RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 COPRSQ9NQ92 184 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 SMC4Q9NTJ3 1288 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 TMOD2Q9NZR1 351 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 CPA4Q9UI42 421 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 FBXO3Q9UK99 471 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
USP3-212ENST00000559276 SZT2Q5T011 3432 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 GAKO14976 1311 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 AK9Q5TCS8 1911 aa7.23□□□□□ -1.25
USP3-212ENST00000559276 DOCK1Q14185 1865 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 PDHXO00330 501 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 WDHD1O75717 1129 aaPredicted RBP7.22□□□□□ -1.25
USP3-212ENST00000559276 UBTFL1P0CB47 393 aaPredicted RBP7.22□□□□□ -1.25
USP3-212ENST00000559276 BCRP11274 1271 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 RGS3P49796 1198 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 TIMM10P62072 90 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 RASGRF1Q13972 1273 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 MTFR1Q15390 333 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 SLC9C1Q4G0N8 1177 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 CCDC102BQ68D86 513 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 ANKRD23Q86SG2 305 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 SHISA4Q96DD7 197 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 IDI2Q9BXS1 227 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 DDX4Q9NQI0 724 aaKnown RBP7.22□□□□□ -1.25
USP3-212ENST00000559276 USP40Q9NVE5 1235 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 CEP126Q9P2H0 1117 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.22□□□□□ -1.25
USP3-212ENST00000559276 TNNQ9UQP3 1299 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 SIPA1L1O43166 1804 aa7.22□□□□□ -1.25
USP3-212ENST00000559276 DDTLA6NHG4 134 aaPredicted RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 SEMA3EO15041 775 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 MYCP01106 439 aaPredicted RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 LDHBP07195 334 aaKnown RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 CYP2C8P10632 490 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 OSBPP22059 807 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 IL15P40933 162 aaPredicted RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 RHBDL3P58872 404 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 MTX1Q13505 466 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 UBE2Q1Q7Z7E8 422 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 HOOK2Q96ED9 719 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 FAM163AQ96GL9 167 aaPredicted RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
USP3-212ENST00000559276 PDS5AQ29RF7 1337 aaKnown RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 RANBP2P49792 3224 aaKnown RBP7.21□□□□□ -1.26
USP3-212ENST00000559276 LOC285556D6RIA3 1793 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 ATAD5Q96QE3 1844 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 CDK5RAP2Q96SN8 1893 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 MYO5AQ9Y4I1 1855 aaKnown RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 A0A1B0GUL7 405 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 CXCL11O14625 94 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 ENTPD3O75355 529 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 GNRH1P01148 92 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 CT47B1P0C2W7 299 aaPredicted RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 PTPRAP18433 802 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 PSMC4P43686 418 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP3-212ENST00000559276 TFCP2Q12800 502 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 RRP1BQ14684 758 aaKnown RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 PI16Q6UXB8 463 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 PRRT2Q7Z6L0 340 aaPredicted RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
USP3-212ENST00000559276 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 GABRQQ9UN88 632 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 AFG3L2Q9Y4W6 797 aa7.2□□□□□ -1.26
USP3-212ENST00000559276 GPR75-ASB3A0A0A6YYF3 556 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 PRMT2P55345 433 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 MECOMQ03112 1051 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 PRKCZQ05513 592 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 PDE3AQ14432 1141 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 ARHGEF6Q15052 776 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 SLC4A8Q2Y0W8 1093 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 ARHGAP45Q92619 1136 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 GCC1Q96CN9 775 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 XAGE2Q96GT9 111 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 TMEM106CQ9BVX2 250 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
USP3-212ENST00000559276 GNL3LQ9NVN8 582 aaKnown RBP7.19□□□□□ -1.26
USP3-212ENST00000559276 HMG20BQ9P0W2 317 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 COLQQ9Y215 455 aaPredicted RBP7.19□□□□□ -1.26
USP3-212ENST00000559276 ZHX2Q9Y6X8 837 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 FOCADQ5VW36 1801 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 MROH7-TTC4A0A0A0MT08 1334 aa7.19□□□□□ -1.26
USP3-212ENST00000559276 PNMA6EA0A0J9YXQ4 647 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 FAM196BA6NMK8 535 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 H0YGN5 161 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 TRIM27P14373 513 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 GRK4P32298 578 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 BTDP43251 543 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 JAG1P78504 1218 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms