RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NFIXQ14938 502 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 TRAPPC3LQ5T215 181 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 KRT40Q6A162 431 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
TPM1-210ENST00000558264 C4AP0C0L4 1744 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 C4BP0C0L5 1744 aa12.3□□□□□ -0.44
TPM1-210ENST00000558264 MECOMQ03112 1051 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 WTAPQ15007 396 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 NTRK3Q16288 839 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 KRT23Q9C075 422 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 TTC12Q9H892 705 aaPredicted RBP12.29□□□□□ -0.44
TPM1-210ENST00000558264 CBX8Q9HC52 389 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
TPM1-210ENST00000558264 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 TM4SF1P30408 202 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
TPM1-210ENST00000558264 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
TPM1-210ENST00000558264 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 CNNM2Q9H8M5 875 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
TPM1-210ENST00000558264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
TPM1-210ENST00000558264 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
TPM1-210ENST00000558264 SYNE3Q6ZMZ3 975 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 FAM200AQ8TCP9 573 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 KCNJ14Q9UNX9 436 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 ZKSCAN5Q9Y2L8 839 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 NDUFA8P51970 172 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
TPM1-210ENST00000558264 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
TPM1-210ENST00000558264 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
TPM1-210ENST00000558264 A0A1B0GUL6 1792 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 ERICH2A1L162 156 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 USP17L12C9JPN9 530 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 USP17L21D6R901 530 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 KINO60870 393 aaKnown RBP12.27□□□□□ -0.44
TPM1-210ENST00000558264 CDKL5O76039 1030 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 CYP2D6P10635 497 aa12.27□□□□□ -0.44
TPM1-210ENST00000558264 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.44
TPM1-210ENST00000558264 C17orf53Q8N3J3 647 aaPredicted RBP12.27□□□□□ -0.44
TPM1-210ENST00000558264 NSUN4Q96CB9 384 aaKnown RBP12.27□□□□□ -0.44
TPM1-210ENST00000558264 TNRC6CQ9HCJ0 1690 aaKnown RBP12.27□□□□□ -0.45
TPM1-210ENST00000558264 TNKSO95271 1327 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 SPTLC2O15270 562 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 LIFRP42702 1097 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 RTN1Q16799 776 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 CHD4Q14839 1912 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.45
TPM1-210ENST00000558264 CACNA1SQ13698 1873 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 THSD7AQ9UPZ6 1657 aa12.27□□□□□ -0.45
TPM1-210ENST00000558264 NMT2O60551 498 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 ZNF165P49910 485 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 FAM160A1Q05DH4 1040 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 SSRP1Q08945 709 aaKnown RBP12.26□□□□□ -0.45
TPM1-210ENST00000558264 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
TPM1-210ENST00000558264 HS1BP3Q53T59 392 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
TPM1-210ENST00000558264 ENGASEQ8NFI3 743 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 MRPS27Q92552 414 aaKnown RBP12.26□□□□□ -0.45
TPM1-210ENST00000558264 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 TRIM29Q14134 588 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 GRIK5Q16478 980 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 MROH7-TTC4A0A0A0MT08 1334 aa12.26□□□□□ -0.45
TPM1-210ENST00000558264 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
TPM1-210ENST00000558264 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
TPM1-210ENST00000558264 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 BTBD18B2RXH4 712 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 ATP2B1P20020 1258 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 PIBF1Q8WXW3 757 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 ESR2Q92731 530 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 ANKRD2Q9GZV1 360 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
TPM1-210ENST00000558264 BIN1O00499 593 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 TRIM37O94972 964 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 ATL3Q6DD88 541 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 ADALQ6DHV7 355 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms