RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 M0R2C6 588 aa17■□□□□ 0.31
SNX6-206ENST00000556162 GPAA1O43292 621 aa17■□□□□ 0.31
SNX6-206ENST00000556162 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
SNX6-206ENST00000556162 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
SNX6-206ENST00000556162 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
SNX6-206ENST00000556162 SLC4A4Q9Y6R1 1079 aa17■□□□□ 0.31
SNX6-206ENST00000556162 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
SNX6-206ENST00000556162 FLT1P17948 1338 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 C1QTNF8P60827 252 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 NBPF12Q5TAG4 269 aaPredicted RBP16.99■□□□□ 0.31
SNX6-206ENST00000556162 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
SNX6-206ENST00000556162 TEPSINQ96N21 525 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
SNX6-206ENST00000556162 PRKAB2O43741 272 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 GNAT2P19087 354 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 SDR42E1Q8WUS8 393 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
SNX6-206ENST00000556162 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
SNX6-206ENST00000556162 CHMLP26374 656 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 CST9Q5W186 159 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 CSRNP1Q96S65 589 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 DDTLA6NHG4 134 aaPredicted RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 APPP05067 770 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 APLP1P51693 650 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 MFAP1P55081 439 aaKnown RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 SH3BP5LQ7L8J4 393 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 C2orf69Q8N8R5 385 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
SNX6-206ENST00000556162 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
SNX6-206ENST00000556162 AK9Q5TCS8 1911 aa16.96■□□□□ 0.31
SNX6-206ENST00000556162 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
SNX6-206ENST00000556162 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.31
SNX6-206ENST00000556162 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
SNX6-206ENST00000556162 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
SNX6-206ENST00000556162 MKRN1Q9UHC7 482 aaKnown RBP16.96■□□□□ 0.31
SNX6-206ENST00000556162 PALD1Q9ULE6 856 aa16.96■□□□□ 0.31
SNX6-206ENST00000556162 PRKG1Q13976 671 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 GIMAP6Q6P9H5 292 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
SNX6-206ENST00000556162 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 ATRNL1Q5VV63 1379 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 POLR3DP05423 398 aaPredicted RBP16.95■□□□□ 0.3
SNX6-206ENST00000556162 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 FKBP1BP68106 108 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 DCAF15Q66K64 600 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 AMOTL1Q8IY63 956 aa16.95■□□□□ 0.3
SNX6-206ENST00000556162 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
SNX6-206ENST00000556162 COL2A1P02458 1487 aaPredicted RBP16.94■□□□□ 0.3
SNX6-206ENST00000556162 MIGA2Q7L4E1 593 aa16.94■□□□□ 0.3
SNX6-206ENST00000556162 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
SNX6-206ENST00000556162 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
SNX6-206ENST00000556162 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 FOXP4Q8IVH2 680 aaPredicted RBP16.93■□□□□ 0.3
SNX6-206ENST00000556162 IFNL3Q8IZI9 196 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
SNX6-206ENST00000556162 RAD50Q92878 1312 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 CDC45O75419 566 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 TDO2P48775 406 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
SNX6-206ENST00000556162 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 USP17L21D6R901 530 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 TBC1D12O60347 775 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 USP2O75604 605 aaPredicted RBP16.92■□□□□ 0.3
SNX6-206ENST00000556162 IREB2P48200 963 aaKnown RBP16.92■□□□□ 0.3
SNX6-206ENST00000556162 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 TRIM34Q9BYJ4 488 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 ABT1Q9ULW3 272 aaKnown RBP16.92■□□□□ 0.3
SNX6-206ENST00000556162 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
SNX6-206ENST00000556162 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
SNX6-206ENST00000556162 HSPA6P17066 643 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 PLCD1P51178 756 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 CTR9Q6PD62 1173 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 CRACR2BQ8N4Y2 399 aaPredicted RBP16.91■□□□□ 0.3
SNX6-206ENST00000556162 NAPBQ9H115 298 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNX6-206ENST00000556162 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
SNX6-206ENST00000556162 ARPP21Q9UBL0 812 aaPredicted RBP16.91■□□□□ 0.3
SNX6-206ENST00000556162 HERC5Q9UII4 1024 aaKnown RBP16.91■□□□□ 0.3
SNX6-206ENST00000556162 SSC5DA1L4H1 1573 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
SNX6-206ENST00000556162 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 SGSM2O43147 1006 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 HUNKP57058 714 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms