RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ADGRA2Q96PE1 1338 aa24.35■■□□□ 1.49
PRKCH-219ENST00000555906 MECOMQ03112 1051 aa24.34■■□□□ 1.49
PRKCH-219ENST00000555906 G3BP1Q13283 466 aaKnown RBP eCLIP24.34■■□□□ 1.49
PRKCH-219ENST00000555906 KIF22Q14807 665 aa24.34■■□□□ 1.49
PRKCH-219ENST00000555906 SH3BP5LQ7L8J4 393 aa24.34■■□□□ 1.49
PRKCH-219ENST00000555906 SPATA5Q8NB90 893 aa24.34■■□□□ 1.49
PRKCH-219ENST00000555906 PTCH2Q9Y6C5 1203 aa24.34■■□□□ 1.49
PRKCH-219ENST00000555906 MGAMO43451 1857 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 GPR75-ASB3A0A0A6YYF3 556 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 POTEFA5A3E0 1075 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 PHF20L1A8MW92 1017 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 MOGSQ13724 837 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 GORABQ5T7V8 394 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 SCYL3Q8IZE3 742 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 ZNF384Q8TF68 577 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 ZNF333Q96JL9 665 aa24.33■■□□□ 1.49
PRKCH-219ENST00000555906 DDX4Q9NQI0 724 aaKnown RBP24.33■■□□□ 1.49
PRKCH-219ENST00000555906 FOCADQ5VW36 1801 aa24.33■■□□□ 1.48
PRKCH-219ENST00000555906 CDK5RAP2Q96SN8 1893 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 PDHXO00330 501 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 GNRH1P01148 92 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 HNRNPUQ00839 825 aaKnown RBP eCLIP24.32■■□□□ 1.48
PRKCH-219ENST00000555906 MAP3K10Q02779 954 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 SLC9C1Q4G0N8 1177 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 C17orf99Q6UX52 265 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 PI16Q6UXB8 463 aa24.32■■□□□ 1.48
PRKCH-219ENST00000555906 ZSCAN29Q8IWY8 852 aaPredicted RBP24.32■■□□□ 1.48
PRKCH-219ENST00000555906 DDTLA6NHG4 134 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-219ENST00000555906 CXCL11O14625 94 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 NPM3O75607 178 aaKnown RBP24.31■■□□□ 1.48
PRKCH-219ENST00000555906 MAP4K4O95819 1239 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-219ENST00000555906 RHBDL3P58872 404 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 GSTO1P78417 241 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 PICALMQ13492 652 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 POLA2Q14181 598 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 NSUN4Q96CB9 384 aaKnown RBP24.31■■□□□ 1.48
PRKCH-219ENST00000555906 ARHGAP39Q9C0H5 1083 aa24.31■■□□□ 1.48
PRKCH-219ENST00000555906 UQCRFS1P1P0C7P4 283 aa24.3■■□□□ 1.48
PRKCH-219ENST00000555906 MCAMP43121 646 aa24.3■■□□□ 1.48
PRKCH-219ENST00000555906 PRMT2P55345 433 aa24.3■■□□□ 1.48
PRKCH-219ENST00000555906 PARK7Q99497 189 aaKnown RBP24.3■■□□□ 1.48
PRKCH-219ENST00000555906 GPR108Q9NPR9 543 aa24.3■■□□□ 1.48
PRKCH-219ENST00000555906 PICK1Q9NRD5 415 aa24.3■■□□□ 1.48
PRKCH-219ENST00000555906 MYO5AQ9Y4I1 1855 aaKnown RBP24.3■■□□□ 1.48
PRKCH-219ENST00000555906 LOC285556D6RIA3 1793 aa24.29■■□□□ 1.48
PRKCH-219ENST00000555906 NBPF11Q86T75 865 aa24.29■■□□□ 1.48
PRKCH-219ENST00000555906 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
PRKCH-219ENST00000555906 SSH3Q8TE77 659 aa24.29■■□□□ 1.48
PRKCH-219ENST00000555906 SIPA1L1O43166 1804 aa24.28■■□□□ 1.48
PRKCH-219ENST00000555906 A0A0G2JLL6 359 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-219ENST00000555906 LDHCP07864 332 aa24.28■■□□□ 1.48
PRKCH-219ENST00000555906 PTPRAP18433 802 aa24.28■■□□□ 1.48
PRKCH-219ENST00000555906 PRRT2Q7Z6L0 340 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-219ENST00000555906 CPA4Q9UI42 421 aa24.28■■□□□ 1.48
PRKCH-219ENST00000555906 CTNND1O60716 968 aaKnown RBP24.27■■□□□ 1.48
PRKCH-219ENST00000555906 TNNI3KQ59H18 835 aa24.27■■□□□ 1.48
PRKCH-219ENST00000555906 TBC1D9Q6ZT07 1266 aa24.27■■□□□ 1.48
PRKCH-219ENST00000555906 RAI14Q9P0K7 980 aa24.27■■□□□ 1.48
PRKCH-219ENST00000555906 ZHX2Q9Y6X8 837 aa24.27■■□□□ 1.48
PRKCH-219ENST00000555906 FPGT-TNNI3KV9GXZ4 949 aa24.27■■□□□ 1.48
PRKCH-219ENST00000555906 TBC1D12O60347 775 aa24.26■■□□□ 1.47
PRKCH-219ENST00000555906 GPAT2Q6NUI2 795 aa24.26■■□□□ 1.47
PRKCH-219ENST00000555906 FASTKD5Q7L8L6 764 aaKnown RBP24.26■■□□□ 1.47
PRKCH-219ENST00000555906 TMEM106CQ9BVX2 250 aa24.26■■□□□ 1.47
PRKCH-219ENST00000555906 AFG3L2Q9Y4W6 797 aa24.26■■□□□ 1.47
PRKCH-219ENST00000555906 ATP8B2P98198 1209 aa24.25■■□□□ 1.47
PRKCH-219ENST00000555906 OS9Q13438 667 aaPredicted RBP24.25■■□□□ 1.47
PRKCH-219ENST00000555906 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
PRKCH-219ENST00000555906 OSBPL5Q9H0X9 879 aaPredicted RBP24.25■■□□□ 1.47
PRKCH-219ENST00000555906 SLC45A1Q9Y2W3 748 aa24.25■■□□□ 1.47
PRKCH-219ENST00000555906 CTGFP29279 349 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 TTC39AQ5SRH9 613 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 MIER1Q8N108 512 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 TRIM47Q96LD4 638 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 C1orf115Q9H7X2 142 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 LRP2BPQ9P2M1 347 aa24.24■■□□□ 1.47
PRKCH-219ENST00000555906 SLURP2P0DP57 97 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 BCRP11274 1271 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 EN2P19622 333 aaPredicted RBP24.23■■□□□ 1.47
PRKCH-219ENST00000555906 PSMC4P43686 418 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 DBNDD2Q9BQY9 259 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 SRRDQ9UH36 339 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 ZBED9Q6R2W3 1325 aa24.23■■□□□ 1.47
PRKCH-219ENST00000555906 CYP2C8P10632 490 aa24.22■■□□□ 1.47
PRKCH-219ENST00000555906 RLBP1P12271 317 aa24.22■■□□□ 1.47
PRKCH-219ENST00000555906 CCDC158Q5M9N0 1113 aa24.22■■□□□ 1.47
PRKCH-219ENST00000555906 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
PRKCH-219ENST00000555906 SH3TC2Q8TF17 1288 aa24.22■■□□□ 1.47
PRKCH-219ENST00000555906 ZNF512BQ96KM6 892 aaPredicted RBP24.22■■□□□ 1.47
PRKCH-219ENST00000555906 NOL10Q9BSC4 688 aaKnown RBP24.22■■□□□ 1.47
PRKCH-219ENST00000555906 NOP58Q9Y2X3 529 aaKnown RBP24.22■■□□□ 1.47
PRKCH-219ENST00000555906 IGSF3O75054 1194 aa24.21■■□□□ 1.47
PRKCH-219ENST00000555906 SURF6O75683 361 aaKnown RBP24.21■■□□□ 1.47
PRKCH-219ENST00000555906 OSBPP22059 807 aa24.21■■□□□ 1.47
PRKCH-219ENST00000555906 HOXD10P28358 340 aa24.21■■□□□ 1.47
PRKCH-219ENST00000555906 GADL1Q6ZQY3 521 aa24.21■■□□□ 1.47
PRKCH-219ENST00000555906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.21■■□□□ 1.47
PRKCH-219ENST00000555906 MYPNQ86TC9 1320 aa24.2■■□□□ 1.46
PRKCH-219ENST00000555906 ZBTB7BO15156 539 aaPredicted RBP24.2■■□□□ 1.46
PRKCH-219ENST00000555906 FMNL1O95466 1100 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms