RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 FAM83AQ86UY5 434 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
ABCD4-223ENST00000555904 DCP1AQ9NPI6 582 aaPredicted RBP14.94□□□□□ -0.02
ABCD4-223ENST00000555904 MCM9Q9NXL9 1143 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 ARPP21Q9UBL0 812 aaPredicted RBP14.94□□□□□ -0.02
ABCD4-223ENST00000555904 CTNNA3Q9UI47 895 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 ASTN2O75129 1339 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-223ENST00000555904 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 POLR3DP05423 398 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-223ENST00000555904 HLA-DOAP06340 250 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 C8orf34Q49A92 452 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 VPS53Q5VIR6 699 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 KRT26Q7Z3Y9 468 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 FAM151AQ8WW52 585 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 OSBPL5Q9H0X9 879 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-223ENST00000555904 IL25Q9H293 177 aa14.93□□□□□ -0.02
ABCD4-223ENST00000555904 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
ABCD4-223ENST00000555904 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
ABCD4-223ENST00000555904 ZMYM6O95789 1325 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 RASA3Q14644 834 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 HOOK2Q96ED9 719 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 TRIM34Q9BYJ4 488 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 DEFB129Q9H1M3 183 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 DDX4Q9NQI0 724 aaKnown RBP14.92□□□□□ -0.02
ABCD4-223ENST00000555904 FAM198AQ9UFP1 575 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 SAP30BPQ9UHR5 308 aaKnown RBP14.92□□□□□ -0.02
ABCD4-223ENST00000555904 COL2A1P02458 1487 aaPredicted RBP14.92□□□□□ -0.02
ABCD4-223ENST00000555904 ECM29Q5VYK3 1845 aa14.92□□□□□ -0.02
ABCD4-223ENST00000555904 SLC3A2P08195 630 aaKnown RBP14.91□□□□□ -0.02
ABCD4-223ENST00000555904 MCCP23508 829 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 ALX1Q15699 326 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 IMMTQ16891 758 aaKnown RBP14.91□□□□□ -0.02
ABCD4-223ENST00000555904 RNF20Q5VTR2 975 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 CDC37L1Q7L3B6 337 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 CSRNP1Q96S65 589 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
ABCD4-223ENST00000555904 PGAP2Q9UHJ9 254 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
ABCD4-223ENST00000555904 CNTNAP1P78357 1384 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 ATRNL1Q5VV63 1379 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 MINDY4BA8MYZ0 360 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 USP17L12C9JPN9 530 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 USP17L21D6R901 530 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 EPB41L2O43491 1005 aaKnown RBP14.9□□□□□ -0.02
ABCD4-223ENST00000555904 FGAP02671 866 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 NF2P35240 595 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 PTH1RQ03431 593 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 CRACR2BQ8N4Y2 399 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-223ENST00000555904 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 TMEM39BQ9GZU3 492 aa14.9□□□□□ -0.02
ABCD4-223ENST00000555904 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
ABCD4-223ENST00000555904 MKRN1Q9UHC7 482 aaKnown RBP14.9□□□□□ -0.02
ABCD4-223ENST00000555904 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 ZNF213O14771 459 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 FOXP2O15409 715 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 SLC4A8Q2Y0W8 1093 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 SUPT20HL1Q3ZLR7 823 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 SBK1Q52WX2 424 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-223ENST00000555904 CHADLQ6NUI6 762 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 CTR9Q6PD62 1173 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 ZNF784Q8NCA9 323 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-223ENST00000555904 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
ABCD4-223ENST00000555904 SCAF8Q9UPN6 1271 aaKnown RBP14.89□□□□□ -0.03
ABCD4-223ENST00000555904 RBM8AQ9Y5S9 174 aaKnown RBP14.89□□□□□ -0.03
ABCD4-223ENST00000555904 ADM5C9JUS6 153 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 ZKSCAN1P17029 563 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-223ENST00000555904 PPARAQ07869 468 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 ZFPM1Q8IX07 1006 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 SERPINB13Q9UIV8 391 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
ABCD4-223ENST00000555904 FOCADQ5VW36 1801 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-223ENST00000555904 PDE4BQ07343 736 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 C12orf60Q5U649 245 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 SMC1BQ8NDV3 1235 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 GLIS2Q9BZE0 524 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-223ENST00000555904 EHD4Q9H223 541 aa14.87□□□□□ -0.03
ABCD4-223ENST00000555904 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-223ENST00000555904 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
ABCD4-223ENST00000555904 DDX60LQ5H9U9 1706 aaKnown RBP14.86□□□□□ -0.03
ABCD4-223ENST00000555904 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
ABCD4-223ENST00000555904 KIF3CO14782 793 aa14.86□□□□□ -0.03
ABCD4-223ENST00000555904 CYP2D6P10635 497 aa14.86□□□□□ -0.03
ABCD4-223ENST00000555904 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
ABCD4-223ENST00000555904 HAND2P61296 217 aa14.86□□□□□ -0.03
ABCD4-223ENST00000555904 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
ABCD4-223ENST00000555904 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
ABCD4-223ENST00000555904 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 TOMM70O94826 608 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 PLCD1P51178 756 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms