RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 INHBEP58166 350 aa15.93■□□□□ 0.14
SHMT2-211ENST00000554310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHMT2-211ENST00000554310 OPTNQ96CV9 577 aa15.93■□□□□ 0.14
SHMT2-211ENST00000554310 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
SHMT2-211ENST00000554310 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
SHMT2-211ENST00000554310 SPDYE5A6NIY4 337 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 BAG3O95817 575 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 PLCG2P16885 1265 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 PICALMQ13492 652 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 DDX4Q9NQI0 724 aaKnown RBP15.92■□□□□ 0.14
SHMT2-211ENST00000554310 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-211ENST00000554310 SNCAIPQ9Y6H5 919 aa15.92■□□□□ 0.14
SHMT2-211ENST00000554310 DOCK1Q14185 1865 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 IDH1O75874 414 aaKnown RBP15.91■□□□□ 0.14
SHMT2-211ENST00000554310 GJA5P36382 358 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 TTF1Q15361 905 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-211ENST00000554310 MIGA2Q7L4E1 593 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 ZSCAN29Q8IWY8 852 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-211ENST00000554310 ZFPM1Q8IX07 1006 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 CFHR5Q9BXR6 569 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 ZNF112Q9UJU3 913 aa15.91■□□□□ 0.14
SHMT2-211ENST00000554310 PPP4CP60510 307 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 MAP3K12Q12852 859 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 SH3BP5LQ7L8J4 393 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 ADGRA1Q86SQ6 560 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 ZKSCAN4Q969J2 545 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-211ENST00000554310 OTUD5Q96G74 571 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
SHMT2-211ENST00000554310 AATFQ9NY61 560 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHMT2-211ENST00000554310 TESPA1A2RU30 521 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-211ENST00000554310 GTF2A2P52657 109 aa15.89■□□□□ 0.13
SHMT2-211ENST00000554310 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
SHMT2-211ENST00000554310 NOL9Q5SY16 702 aaKnown RBP15.89■□□□□ 0.13
SHMT2-211ENST00000554310 OTUD7BQ6GQQ9 843 aa15.89■□□□□ 0.13
SHMT2-211ENST00000554310 IFNL1Q8IU54 200 aa15.89■□□□□ 0.13
SHMT2-211ENST00000554310 SH3RF3Q8TEJ3 882 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-211ENST00000554310 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-211ENST00000554310 ANTXR1Q9H6X2 564 aa15.89■□□□□ 0.13
SHMT2-211ENST00000554310 NDUFB9Q9Y6M9 179 aa15.89■□□□□ 0.13
SHMT2-211ENST00000554310 MYH7P12883 1935 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 DDTLA6NHG4 134 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-211ENST00000554310 IGF2BP3O00425 579 aaKnown RBP eCLIP15.88■□□□□ 0.13
SHMT2-211ENST00000554310 CYP7A1P22680 504 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 INPP5BP32019 993 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 PPIL2Q13356 520 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 CRBNQ96SW2 442 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
SHMT2-211ENST00000554310 TBC1D8O95759 1140 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 ATP5JP18859 108 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 MAP3K10Q02779 954 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 PPATQ06203 517 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 AAMPQ13685 434 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 DNAJC2Q99543 621 aaKnown RBP15.87■□□□□ 0.13
SHMT2-211ENST00000554310 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 FLT1P17948 1338 aa15.87■□□□□ 0.13
SHMT2-211ENST00000554310 DDX60LQ5H9U9 1706 aaKnown RBP15.86■□□□□ 0.13
SHMT2-211ENST00000554310 CCL15-CCL14A0A0B4J2E2 113 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 GOLIM4O00461 696 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 TBC1D12O60347 775 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 CETPP11597 493 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 SNAPC2Q13487 334 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 CCL15Q16663 113 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
SHMT2-211ENST00000554310 ATAD5Q96QE3 1844 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 MYH1P12882 1939 aa15.86■□□□□ 0.13
SHMT2-211ENST00000554310 NAV1Q8NEY1 1877 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 IRF6O14896 467 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 SMARCA5O60264 1052 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-211ENST00000554310 CAPN15O75808 1086 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 SCYL3Q8IZE3 742 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 GPATCH3Q96I76 525 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 HAUS7Q99871 368 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 PICK1Q9NRD5 415 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
SHMT2-211ENST00000554310 PTPRFP10586 1907 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 GPR25O00155 361 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 CTNND1O60716 968 aaKnown RBP15.84■□□□□ 0.13
SHMT2-211ENST00000554310 PDE6AP16499 860 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 MAPKAPK5Q8IW41 473 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 TGFBRAP1Q8WUH2 860 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 ZNF296Q8WUU4 475 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-211ENST00000554310 PTPN18Q99952 460 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 BOLA2Q9H3K6 86 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 ZCCHC17Q9NP64 241 aaKnown RBP15.84■□□□□ 0.13
SHMT2-211ENST00000554310 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 PI4KBQ9UBF8 816 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 HERC5Q9UII4 1024 aaKnown RBP15.84■□□□□ 0.13
SHMT2-211ENST00000554310 KCNH4Q9UQ05 1017 aa15.84■□□□□ 0.13
SHMT2-211ENST00000554310 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms