RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-206ENST00000553447 SLKQ9H2G2 1235 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-206ENST00000553447 TACC3Q9Y6A5 838 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 DICER1Q9UPY3 1922 aaKnown RBP20.8■□□□□ 0.92
PSEN1-206ENST00000553447 RAD17O75943 681 aa20.8■□□□□ 0.92
PSEN1-206ENST00000553447 VIL1P09327 827 aaKnown RBP20.8■□□□□ 0.92
PSEN1-206ENST00000553447 MFSD6Q6ZSS7 791 aa20.8■□□□□ 0.92
PSEN1-206ENST00000553447 TGFBRAP1Q8WUH2 860 aa20.8■□□□□ 0.92
PSEN1-206ENST00000553447 ZDHHC15Q96MV8 337 aa20.8■□□□□ 0.92
PSEN1-206ENST00000553447 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
PSEN1-206ENST00000553447 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
PSEN1-206ENST00000553447 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
PSEN1-206ENST00000553447 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 PSMD14O00487 310 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 PRC1O43663 620 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 RASSF7Q02833 373 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 JDP2Q8WYK2 163 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 LRRC2Q9BYS8 371 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 AGXT2Q9BYV1 514 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 KRT23Q9C075 422 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 FOXD4L1Q9NU39 408 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 SERPINA10Q9UK55 444 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 TPCN1Q9ULQ1 816 aa20.79■□□□□ 0.92
PSEN1-206ENST00000553447 B4E1Z4 1266 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 LARGE1O95461 756 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 ANTXR2P58335 489 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 FGD1P98174 961 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 APOBEC3HQ6NTF7 200 aaKnown RBP20.78■□□□□ 0.92
PSEN1-206ENST00000553447 CHST3Q7LGC8 479 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 MAPKAPK5Q8IW41 473 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 FBXL16Q8N461 479 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 SH2B1Q9NRF2 756 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-206ENST00000553447 FLT1P17948 1338 aa20.78■□□□□ 0.92
PSEN1-206ENST00000553447 SBF1O95248 1867 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 SMIM22K7EJ46 135 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 USP17L8P0C7I0 530 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 CYP2D6P10635 497 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 PCP11498 1178 aaKnown RBP20.77■□□□□ 0.92
PSEN1-206ENST00000553447 CYB5R4Q7L1T6 521 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 NKX2-3Q8TAU0 364 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 GMLQ99445 158 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 USP40Q9NVE5 1235 aa20.77■□□□□ 0.92
PSEN1-206ENST00000553447 SLC3A2P08195 630 aaKnown RBP20.76■□□□□ 0.91
PSEN1-206ENST00000553447 FGRP09769 529 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 DDIT3P35638 169 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 CXCL9Q07325 125 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 ME3Q16798 604 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 C12orf60Q5U649 245 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 CDC42EP5Q6NZY7 148 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 BRF1Q92994 677 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 INTS4Q96HW7 963 aaKnown RBP20.76■□□□□ 0.91
PSEN1-206ENST00000553447 SYT17Q9BSW7 474 aa20.76■□□□□ 0.91
PSEN1-206ENST00000553447 ROBO3Q96MS0 1386 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 KDM4AO75164 1064 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 PRELPP51888 382 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 EVX2Q03828 476 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 RRP12Q5JTH9 1297 aaKnown RBP20.75■□□□□ 0.91
PSEN1-206ENST00000553447 CIAPIN1Q6FI81 312 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 AGBL3Q8NEM8 1001 aa20.75■□□□□ 0.91
PSEN1-206ENST00000553447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
PSEN1-206ENST00000553447 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-206ENST00000553447 RBM5P52756 815 aaKnown RBP eCLIP20.74■□□□□ 0.91
PSEN1-206ENST00000553447 CFAP100Q494V2 611 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 TMEM87BQ96K49 555 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 TOMM22Q9NS69 142 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 ZSWIM5Q9P217 1185 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
PSEN1-206ENST00000553447 PCDHAC2Q9Y5I4 1007 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 MYH8P13535 1937 aa20.74■□□□□ 0.91
PSEN1-206ENST00000553447 ORC4O43929 436 aa20.73■□□□□ 0.91
PSEN1-206ENST00000553447 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-206ENST00000553447 APOBRQ0VD83 1088 aa20.73■□□□□ 0.91
PSEN1-206ENST00000553447 TNIP1Q15025 636 aa20.73■□□□□ 0.91
PSEN1-206ENST00000553447 ESR2Q92731 530 aa20.73■□□□□ 0.91
PSEN1-206ENST00000553447 CWC22Q9HCG8 908 aaKnown RBP20.73■□□□□ 0.91
PSEN1-206ENST00000553447 GPHNQ9NQX3 736 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-206ENST00000553447 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
PSEN1-206ENST00000553447 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-206ENST00000553447 SH2B2O14492 632 aaPredicted RBP20.72■□□□□ 0.91
PSEN1-206ENST00000553447 EVCP57679 992 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 PDE4BQ07343 736 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 ST3GAL1Q11201 340 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 PICALMQ13492 652 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 SLC4A8Q2Y0W8 1093 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 ARHGAP27Q6ZUM4 889 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 CCDC83Q8IWF9 413 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 CHMP5Q9NZZ3 219 aa20.72■□□□□ 0.91
PSEN1-206ENST00000553447 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
PSEN1-206ENST00000553447 FZD9O00144 591 aa20.71■□□□□ 0.91
PSEN1-206ENST00000553447 NECAB1Q8N987 351 aa20.71■□□□□ 0.91
PSEN1-206ENST00000553447 DDX4Q9NQI0 724 aaKnown RBP20.71■□□□□ 0.91
PSEN1-206ENST00000553447 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
PSEN1-206ENST00000553447 PRDM1O75626 825 aa20.7■□□□□ 0.9
PSEN1-206ENST00000553447 NT5C2P49902 561 aa20.7■□□□□ 0.9
PSEN1-206ENST00000553447 PLCD1P51178 756 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms