RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ECE2O60344 883 aa23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 BAG4O95429 457 aaKnown RBP23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 POLD1P28340 1107 aa23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 TGFB2P61812 414 aa23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 AOC3Q16853 763 aa23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 BAZ2AQ9UIF9 1905 aaKnown RBP23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 MYH2Q9UKX2 1941 aa23.02■■□□□ 1.28
RBFOX1-215ENST00000553186 WDR33Q9C0J8 1336 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 STX6O43752 255 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 RHBDL3P58872 404 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 RRP12Q5JTH9 1297 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 HPS5Q9UPZ3 1129 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 KLF18A0A0U1RQI7 1052 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 JAK2O60674 1132 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 CTDNEP1O95476 244 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 PCP11498 1178 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 CCT2P78371 535 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 SENP2Q9HC62 589 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 NCOA5Q9HCD5 579 aaKnown RBP23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 DAGLAQ9Y4D2 1042 aa23.01■■□□□ 1.27
RBFOX1-215ENST00000553186 USP5P45974 858 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 STRIP1Q5VSL9 837 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 FOXD4L5Q5VV16 416 aaPredicted RBP23■■□□□ 1.27
RBFOX1-215ENST00000553186 RTKN2Q8IZC4 609 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 SMARCC2Q8TAQ2 1214 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 FOXD4L4Q8WXT5 416 aaPredicted RBP23■■□□□ 1.27
RBFOX1-215ENST00000553186 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 LY9Q9HBG7 655 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 TOMM22Q9NS69 142 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 MCM9Q9NXL9 1143 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 USP17L8P0C7I0 530 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 CYP2D6P10635 497 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 LIFRP42702 1097 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 SGMS1Q86VZ5 419 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 NSUN7Q8NE18 718 aaKnown RBP23■■□□□ 1.27
RBFOX1-215ENST00000553186 TGFBRAP1Q8WUH2 860 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 MTA3Q9BTC8 594 aa23■■□□□ 1.27
RBFOX1-215ENST00000553186 NAP1L2Q9ULW6 460 aaPredicted RBP23■■□□□ 1.27
RBFOX1-215ENST00000553186 TTF2Q9UNY4 1162 aaKnown RBP23■■□□□ 1.27
RBFOX1-215ENST00000553186 F8W031 263 aaPredicted RBP22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 PLCG2P16885 1265 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 PSMD1Q99460 953 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 FKBP1AP62942 108 aaKnown RBP22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 TMEM67Q5HYA8 995 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 DACT2Q5SW24 774 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 C12orf60Q5U649 245 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 ESR2Q92731 530 aa22.99■■□□□ 1.27
RBFOX1-215ENST00000553186 DDX11L8A8MPP1 907 aa22.98■■□□□ 1.27
RBFOX1-215ENST00000553186 GOLGA8BA8MQT2 603 aa22.98■■□□□ 1.27
RBFOX1-215ENST00000553186 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
RBFOX1-215ENST00000553186 MTMR6Q9Y217 621 aa22.98■■□□□ 1.27
RBFOX1-215ENST00000553186 ZSCAN22P10073 491 aaPredicted RBP22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 PPIP5K2O43314 1243 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 ORC4O43929 436 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 LARP1BQ659C4 914 aaKnown RBP22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 APOA5Q6Q788 366 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 TEX11Q8IYF3 940 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 PIM2Q9P1W9 311 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 SCN9AQ15858 1988 aa22.97■■□□□ 1.27
RBFOX1-215ENST00000553186 USP17L3A6NCW0 530 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 USP17L4A6NCW7 530 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 PRDM1O75626 825 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 USP17L1Q7RTZ2 530 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 MAPKAPK5Q8IW41 473 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 ZKSCAN3Q9BRR0 538 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 PDIA4P13667 645 aaKnown RBP22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 PDCP20941 246 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 HHIPL2Q6UWX4 724 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 CHMP4CQ96CF2 233 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 CHAMP1Q96JM3 812 aa22.96■■□□□ 1.27
RBFOX1-215ENST00000553186 PTPDC1A2A3K4 754 aa22.95■■□□□ 1.26
RBFOX1-215ENST00000553186 YDJCA8MPS7 323 aa22.95■■□□□ 1.26
RBFOX1-215ENST00000553186 SCNN1DP51172 638 aa22.95■■□□□ 1.26
RBFOX1-215ENST00000553186 FLT1P17948 1338 aa22.95■■□□□ 1.26
RBFOX1-215ENST00000553186 ROBO3Q96MS0 1386 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 SLC3A2P08195 630 aaKnown RBP22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 SART3Q15020 963 aaKnown RBP22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 RAB11FIP4Q86YS3 637 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 DDX11Q96FC9 970 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 LAMB1P07942 1786 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 HMGN5P82970 282 aaKnown RBP22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 SEC23AQ15436 765 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 SLC4A8Q2Y0W8 1093 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 MRIQ9BWK5 157 aa22.94■■□□□ 1.26
RBFOX1-215ENST00000553186 ZNF646O15015 1829 aaPredicted RBP22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 PSDA5PKW4 1024 aaPredicted RBP22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 RANBP6O60518 1105 aaKnown RBP22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 F13A1P00488 732 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 TEKT1Q969V4 418 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 UBAC1Q9BSL1 405 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 DHX16O60231 1041 aaKnown RBP22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 PTGER2P43116 358 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 PLCD1P51178 756 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 PDE4BQ07343 736 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 WTAPQ15007 396 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 SOGA3Q5TF21 947 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms