RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 SMCR8Q8TEV9 937 aaPredicted RBP17.35■□□□□ 0.37
SNRPF-203ENST00000551316 LRFN3Q9BTN0 628 aa17.35■□□□□ 0.37
SNRPF-203ENST00000551316 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
SNRPF-203ENST00000551316 H7C1W4 665 aa17.34■□□□□ 0.37
SNRPF-203ENST00000551316 CSF1RP07333 972 aa17.34■□□□□ 0.37
SNRPF-203ENST00000551316 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
SNRPF-203ENST00000551316 MYO9BQ13459 2157 aa17.33■□□□□ 0.37
SNRPF-203ENST00000551316 ELL2O00472 640 aaPredicted RBP17.33■□□□□ 0.36
SNRPF-203ENST00000551316 CXCL11O14625 94 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 FAM110CQ1W6H9 321 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 THEGQ9P2T0 379 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
SNRPF-203ENST00000551316 PLIN1O60240 522 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 CYP2B6P20813 491 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 EPHB4P54760 987 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
SNRPF-203ENST00000551316 NFIAQ12857 509 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
SNRPF-203ENST00000551316 ATXN2LQ8WWM7 1075 aaKnown RBP17.32■□□□□ 0.36
SNRPF-203ENST00000551316 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
SNRPF-203ENST00000551316 EPHX3Q9H6B9 360 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 AFG3L2Q9Y4W6 797 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 ZHX2Q9Y6X8 837 aa17.32■□□□□ 0.36
SNRPF-203ENST00000551316 TRANK1O15050 2925 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 RTP1P59025 263 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 TCP10Q12799 353 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 CCL14Q16627 93 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 BADQ92934 168 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 ZDHHC15Q96MV8 337 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
SNRPF-203ENST00000551316 SLC45A1Q9Y2W3 748 aa17.31■□□□□ 0.36
SNRPF-203ENST00000551316 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 PTPRAP18433 802 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
SNRPF-203ENST00000551316 FKBP1CQ5VVH2 108 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 CCDC146Q8IYE0 955 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
SNRPF-203ENST00000551316 C11orf16Q9NQ32 467 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 HCN4Q9Y3Q4 1203 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 ARIH1Q9Y4X5 557 aaPredicted RBP17.3■□□□□ 0.36
SNRPF-203ENST00000551316 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
SNRPF-203ENST00000551316 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
SNRPF-203ENST00000551316 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
SNRPF-203ENST00000551316 C1QTNF1Q9BXJ1 281 aa17.29■□□□□ 0.36
SNRPF-203ENST00000551316 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
SNRPF-203ENST00000551316 FASTKD5Q7L8L6 764 aaKnown RBP17.28■□□□□ 0.36
SNRPF-203ENST00000551316 SCYL3Q8IZE3 742 aa17.28■□□□□ 0.36
SNRPF-203ENST00000551316 KHSRPQ92945 711 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNRPF-203ENST00000551316 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
SNRPF-203ENST00000551316 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
SNRPF-203ENST00000551316 AGTPBP1Q9UPW5 1226 aa17.28■□□□□ 0.36
SNRPF-203ENST00000551316 USP34Q70CQ2 3546 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 ANKRD18BA2A2Z9 1011 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 DNAJB2P25686 324 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 ITGB8P26012 769 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 ADGRE1Q14246 886 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 KSR2Q6VAB6 950 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 PRDM5Q9NQX1 630 aaPredicted RBP17.27■□□□□ 0.36
SNRPF-203ENST00000551316 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.36
SNRPF-203ENST00000551316 FAM86C2PA6NEL3 165 aa17.26■□□□□ 0.35
SNRPF-203ENST00000551316 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
SNRPF-203ENST00000551316 HDLBPQ00341 1268 aaKnown RBP17.26■□□□□ 0.35
SNRPF-203ENST00000551316 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
SNRPF-203ENST00000551316 CCDC85BQ15834 202 aaPredicted RBP17.26■□□□□ 0.35
SNRPF-203ENST00000551316 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
SNRPF-203ENST00000551316 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
SNRPF-203ENST00000551316 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
SNRPF-203ENST00000551316 FOXO4P98177 505 aa17.25■□□□□ 0.35
SNRPF-203ENST00000551316 GCKRQ14397 625 aa17.25■□□□□ 0.35
SNRPF-203ENST00000551316 G2E3Q7L622 706 aa17.25■□□□□ 0.35
SNRPF-203ENST00000551316 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
SNRPF-203ENST00000551316 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
SNRPF-203ENST00000551316 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
SNRPF-203ENST00000551316 TFF2Q03403 129 aa17.24■□□□□ 0.35
SNRPF-203ENST00000551316 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
SNRPF-203ENST00000551316 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
SNRPF-203ENST00000551316 PRDM12Q9H4Q4 367 aa17.24■□□□□ 0.35
SNRPF-203ENST00000551316 ZNF576Q9H609 170 aa17.24■□□□□ 0.35
SNRPF-203ENST00000551316 BMP1P13497 986 aa17.23■□□□□ 0.35
SNRPF-203ENST00000551316 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
SNRPF-203ENST00000551316 KCNQ1P51787 676 aa17.23■□□□□ 0.35
SNRPF-203ENST00000551316 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
SNRPF-203ENST00000551316 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
SNRPF-203ENST00000551316 SH3BP5LQ7L8J4 393 aa17.23■□□□□ 0.35
SNRPF-203ENST00000551316 RFX7Q2KHR2 1363 aa17.23■□□□□ 0.35
SNRPF-203ENST00000551316 MYH2Q9UKX2 1941 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 USP6NLQ92738 828 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 PUS3Q9BZE2 481 aaKnown RBP17.22■□□□□ 0.35
SNRPF-203ENST00000551316 TXNRD2Q9NNW7 524 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms