RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 RIOK1Q9BRS2 568 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-209ENST00000550872 RFX7Q2KHR2 1363 aa19.57■□□□□ 0.72
CHMP1A-209ENST00000550872 MBD4O95243 580 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 USP5P45974 858 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 FKBP1BP68106 108 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 TTC22Q5TAA0 569 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 LCORLQ8N3X6 602 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 APPBP2Q92624 585 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 CRNKL1Q9BZJ0 848 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 PUS7LQ9H0K6 701 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 ARMT1Q9H993 441 aa19.56■□□□□ 0.72
CHMP1A-209ENST00000550872 PPP1R12BO60237 982 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 MOB2Q70IA6 237 aa19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 ARMC9Q7Z3E5 817 aa19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 AIDAQ96BJ3 306 aa19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 HOOK2Q96ED9 719 aa19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 TLL2Q9Y6L7 1015 aa19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 RPAP1Q9BWH6 1393 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-209ENST00000550872 UBE2Q2LH0YL09 131 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 HSPA1AP0DMV8 641 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 HSPA1BP0DMV9 641 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 HUNKP57058 714 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 SH3BP5LQ7L8J4 393 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 SAPCD2Q86UD0 394 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 OSBPL5Q9H0X9 879 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 ANGEL1Q9UNK9 670 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
CHMP1A-209ENST00000550872 DDTLA6NHG4 134 aaPredicted RBP19.53■□□□□ 0.72
CHMP1A-209ENST00000550872 ZMYM1Q5SVZ6 1142 aa19.53■□□□□ 0.72
CHMP1A-209ENST00000550872 CSRNP1Q96S65 589 aa19.53■□□□□ 0.72
CHMP1A-209ENST00000550872 SSC5DA1L4H1 1573 aa19.53■□□□□ 0.72
CHMP1A-209ENST00000550872 FLT1P17948 1338 aa19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 DEFB115Q30KQ5 88 aa19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 DCAF15Q66K64 600 aa19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 MIGA2Q7L4E1 593 aa19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 TICAM2Q86XR7 235 aa19.52■□□□□ 0.72
CHMP1A-209ENST00000550872 M0R2C6 588 aa19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 PRKAB2O43741 272 aa19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 IREB2P48200 963 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 PAXIP1Q6ZW49 1069 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 TNS4Q8IZW8 715 aa19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 SDR42E1Q8WUS8 393 aa19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 STRBPQ96SI9 672 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 SEC62Q99442 399 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 DHX36Q9H2U1 1008 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 MKRN1Q9UHC7 482 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 SAP30BPQ9UHR5 308 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 SLC4A4Q9Y6R1 1079 aa19.51■□□□□ 0.71
CHMP1A-209ENST00000550872 CDK5RAP2Q96SN8 1893 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 PAPPA2Q9BXP8 1791 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 RASSF10A6NK89 507 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 GPAA1O43292 621 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 SDSP20132 328 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 MAP3K11Q16584 847 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
CHMP1A-209ENST00000550872 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 HELLSQ9NRZ9 838 aa19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.49■□□□□ 0.71
CHMP1A-209ENST00000550872 COL2A1P02458 1487 aaPredicted RBP19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 HLA-DOAP06340 250 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 NMIQ13287 307 aaPredicted RBP19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 LDLRAD1Q5T700 205 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 RGMBQ6NW40 437 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 HHIPL1Q96JK4 782 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 FAM227BQ96M60 508 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 ATP8A2Q9NTI2 1148 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 PI4KBQ9UBF8 816 aa19.48■□□□□ 0.71
CHMP1A-209ENST00000550872 FOCADQ5VW36 1801 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 HIP1O00291 1037 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 POLR3DP05423 398 aaPredicted RBP19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 GNAT2P19087 354 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 ZNF157P51786 506 aaPredicted RBP19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 MAP3K9P80192 1104 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 GRM1Q13255 1194 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 MCMDC2Q4G0Z9 681 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 TTC6Q86TZ1 520 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 FOXP4Q8IVH2 680 aaPredicted RBP19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 MYH1P12882 1939 aa19.47■□□□□ 0.71
CHMP1A-209ENST00000550872 A0A0D9SFI3 127 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 APPP05067 770 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 SLURP2P0DP57 97 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 CYP4F22Q6NT55 531 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 CCDC129Q6ZRS4 1044 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 ANKRD13AQ8IZ07 590 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 SLC10A4Q96EP9 437 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 WRNIP1Q96S55 665 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 TRIM34Q9BYJ4 488 aa19.46■□□□□ 0.71
CHMP1A-209ENST00000550872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.46■□□□□ 0.718e-18■■■■■ 88.3
CHMP1A-209ENST00000550872 UNCXA6NJT0 531 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms