RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ARHGEF6Q15052 776 aa16.5■□□□□ 0.23
NUP188-211ENST00000550219 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
NUP188-211ENST00000550219 ZCCHC17Q9NP64 241 aaKnown RBP16.5■□□□□ 0.23
NUP188-211ENST00000550219 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
NUP188-211ENST00000550219 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
NUP188-211ENST00000550219 ENTPD3O75355 529 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 MECOMQ03112 1051 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
NUP188-211ENST00000550219 SLC9C1Q4G0N8 1177 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 NOL9Q5SY16 702 aaKnown RBP16.49■□□□□ 0.23
NUP188-211ENST00000550219 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
NUP188-211ENST00000550219 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
NUP188-211ENST00000550219 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 CPA4Q9UI42 421 aa16.49■□□□□ 0.23
NUP188-211ENST00000550219 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
NUP188-211ENST00000550219 PDHXO00330 501 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 SLC34A2O95436 690 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 SLURP2P0DP57 97 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
NUP188-211ENST00000550219 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 ANKRD23Q86SG2 305 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
NUP188-211ENST00000550219 PICK1Q9NRD5 415 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 KCNH4Q9UQ05 1017 aa16.48■□□□□ 0.23
NUP188-211ENST00000550219 MAST2Q6P0Q8 1798 aa16.47■□□□□ 0.23
NUP188-211ENST00000550219 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
NUP188-211ENST00000550219 ZBTB22O15209 634 aa16.47■□□□□ 0.23
NUP188-211ENST00000550219 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
NUP188-211ENST00000550219 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
NUP188-211ENST00000550219 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
NUP188-211ENST00000550219 DOCK1Q14185 1865 aa16.47■□□□□ 0.23
NUP188-211ENST00000550219 FAM196BA6NMK8 535 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
NUP188-211ENST00000550219 MCAMP43121 646 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 AAMPQ13685 434 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 SH3TC2Q8TF17 1288 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 ZNF384Q8TF68 577 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 TMEM106CQ9BVX2 250 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
NUP188-211ENST00000550219 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
NUP188-211ENST00000550219 HTTP42858 3142 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 PHF20L1A8MW92 1017 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
NUP188-211ENST00000550219 GSTO1P78417 241 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
NUP188-211ENST00000550219 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
NUP188-211ENST00000550219 PARK7Q99497 189 aaKnown RBP16.45■□□□□ 0.22
NUP188-211ENST00000550219 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
NUP188-211ENST00000550219 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 NEFLP07196 543 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 CYP2C8P10632 490 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 RHBDL3P58872 404 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 MOGSQ13724 837 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 SLC4A8Q2Y0W8 1093 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
NUP188-211ENST00000550219 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
NUP188-211ENST00000550219 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 CXCL11O14625 94 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
NUP188-211ENST00000550219 LDHCP07864 332 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 PTPRAP18433 802 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 CTGFP29279 349 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 PSMC4P43686 418 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 POLA2Q14181 598 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
NUP188-211ENST00000550219 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
NUP188-211ENST00000550219 A0A0G2JLL6 359 aaPredicted RBP16.42■□□□□ 0.22
NUP188-211ENST00000550219 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
NUP188-211ENST00000550219 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
NUP188-211ENST00000550219 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
NUP188-211ENST00000550219 PRRT2Q7Z6L0 340 aaPredicted RBP16.42■□□□□ 0.22
NUP188-211ENST00000550219 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
NUP188-211ENST00000550219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP188-211ENST00000550219 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
NUP188-211ENST00000550219 CTNND1O60716 968 aaKnown RBP16.41■□□□□ 0.22
NUP188-211ENST00000550219 OSBPP22059 807 aa16.41■□□□□ 0.22
NUP188-211ENST00000550219 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
NUP188-211ENST00000550219 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
NUP188-211ENST00000550219 FASTKD5Q7L8L6 764 aaKnown RBP16.41■□□□□ 0.22
NUP188-211ENST00000550219 RAET1EQ8TD07 263 aa16.41■□□□□ 0.22
NUP188-211ENST00000550219 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
NUP188-211ENST00000550219 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
NUP188-211ENST00000550219 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms