RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 MYH1P12882 1939 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 ATRNL1Q5VV63 1379 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 NPM3O75607 178 aaKnown RBP21■□□□□ 0.95
CHMP1A-208ENST00000550102 BAG3O95817 575 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 PLCG2P16885 1265 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 TM4SF4P48230 202 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 ZSCAN29Q8IWY8 852 aaPredicted RBP21■□□□□ 0.95
CHMP1A-208ENST00000550102 ZFPM1Q8IX07 1006 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21■□□□□ 0.95
CHMP1A-208ENST00000550102 OPTNQ96CV9 577 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 CRBNQ96SW2 442 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 DDX4Q9NQI0 724 aaKnown RBP21■□□□□ 0.95
CHMP1A-208ENST00000550102 NDUFB9Q9Y6M9 179 aa21■□□□□ 0.95
CHMP1A-208ENST00000550102 SIPA1L1O43166 1804 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 NAV1Q8NEY1 1877 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 GJA5P36382 358 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 TMED8Q6PL24 325 aaPredicted RBP20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 MIGA2Q7L4E1 593 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 TEX11Q8IYF3 940 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 SNCAIPQ9Y6H5 919 aa20.99■□□□□ 0.95
CHMP1A-208ENST00000550102 INHBEP58166 350 aa20.98■□□□□ 0.95
CHMP1A-208ENST00000550102 MAP3K12Q12852 859 aa20.98■□□□□ 0.95
CHMP1A-208ENST00000550102 TTF1Q15361 905 aaPredicted RBP20.98■□□□□ 0.95
CHMP1A-208ENST00000550102 SH3RF3Q8TEJ3 882 aaPredicted RBP20.98■□□□□ 0.95
CHMP1A-208ENST00000550102 AATFQ9NY61 560 aaKnown RBP eCLIP20.98■□□□□ 0.95
CHMP1A-208ENST00000550102 SPDYE5A6NIY4 337 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 ADGRA1Q86SQ6 560 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 ZKSCAN4Q969J2 545 aaPredicted RBP20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 OTUD5Q96G74 571 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 DNAJC2Q99543 621 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 DDX60LQ5H9U9 1706 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-208ENST00000550102 SMARCA5O60264 1052 aaPredicted RBP20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 CYP7A1P22680 504 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 PPP4CP60510 307 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 SH3BP5LQ7L8J4 393 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 ERO1BQ86YB8 467 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 CERS3Q8IU89 383 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 MAGEB6Q8N7X4 407 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 CNKSR2Q8WXI2 1034 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 PTPRFP10586 1907 aa20.96■□□□□ 0.95
CHMP1A-208ENST00000550102 PHIPQ8WWQ0 1821 aa20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 DDTLA6NHG4 134 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 ALDH1A1P00352 501 aa20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 ATP5JP18859 108 aa20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 INPP5BP32019 993 aa20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 OSBPL5Q9H0X9 879 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 ZNF112Q9UJU3 913 aa20.95■□□□□ 0.94
CHMP1A-208ENST00000550102 GOLIM4O00461 696 aa20.94■□□□□ 0.94
CHMP1A-208ENST00000550102 NOL9Q5SY16 702 aaKnown RBP20.94■□□□□ 0.94
CHMP1A-208ENST00000550102 IFNL1Q8IU54 200 aa20.94■□□□□ 0.94
CHMP1A-208ENST00000550102 GPATCH3Q96I76 525 aa20.94■□□□□ 0.94
CHMP1A-208ENST00000550102 GTF2A2P52657 109 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 PPIL2Q13356 520 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 AAMPQ13685 434 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 CFHR5Q9BXR6 569 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 PAG1Q9NWQ8 432 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 FLT1P17948 1338 aa20.93■□□□□ 0.94
CHMP1A-208ENST00000550102 IGF2BP3O00425 579 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 OTUD7BQ6GQQ9 843 aa20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 MIGA1Q8NAN2 632 aa20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 TGFBRAP1Q8WUH2 860 aa20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 HAUS7Q99871 368 aa20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 BOLA2Q9H3K6 86 aa20.92■□□□□ 0.94
CHMP1A-208ENST00000550102 CCL15-CCL14A0A0B4J2E2 113 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 TESPA1A2RU30 521 aaPredicted RBP20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 TBC1D8O95759 1140 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 PDE6AP16499 860 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 MAP3K10Q02779 954 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 CCL15Q16663 113 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 SLC9C2Q5TAH2 1124 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 MS4A4AQ96JQ5 239 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 DHX36Q9H2U1 1008 aaKnown RBP20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 ECHDC1Q9NTX5 307 aa20.91■□□□□ 0.94
CHMP1A-208ENST00000550102 PHF20L1A8MW92 1017 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 DYNLL1P63167 89 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 PPATQ06203 517 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 SNAPC2Q13487 334 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 NOM1Q5C9Z4 860 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 MAPKAPK5Q8IW41 473 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 SCYL3Q8IZE3 742 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 EDC3Q96F86 508 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 PICK1Q9NRD5 415 aa20.9■□□□□ 0.94
CHMP1A-208ENST00000550102 MYH8P13535 1937 aa20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 IRF6O14896 467 aa20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 TBC1D12O60347 775 aa20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 CETPP11597 493 aa20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 BRI3BPQ8WY22 251 aa20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.89■□□□□ 0.938e-18■■■■■ 88.3
CHMP1A-208ENST00000550102 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
CHMP1A-208ENST00000550102 FAM196BA6NMK8 535 aa20.88■□□□□ 0.93
CHMP1A-208ENST00000550102 PTPN18Q99952 460 aa20.88■□□□□ 0.93
CHMP1A-208ENST00000550102 PI4KBQ9UBF8 816 aa20.88■□□□□ 0.93
CHMP1A-208ENST00000550102 ZNF532Q9HCE3 1301 aa20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 BAZ2AQ9UIF9 1905 aaKnown RBP20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 MAGEB6P1A0A0J9YX57 407 aa20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 CTNND1O60716 968 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms