RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ECM29Q5VYK3 1845 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 NFKBIEO00221 500 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 PPIP5K2O43314 1243 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 TBC1D12O60347 775 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 LDHBP07195 334 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 HSPD1P10809 573 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 NECTIN1Q15223 517 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 SOGA3Q5TF21 947 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 LCORLQ8N3X6 602 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 ZGPATQ8N5A5 531 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 CERS5Q8N5B7 392 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 DSCC1Q9BVC3 393 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 TAF6LQ9Y6J9 622 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 NAV1Q8NEY1 1877 aa9.7□□□□□ -0.86
DEPDC4-207ENST00000549249 SLC27A2O14975 620 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 MBD4O95243 580 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 MCCP23508 829 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 ANP32AP39687 249 aaKnown RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 DYNLL1P63167 89 aaKnown RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 MFSD14BQ5SR56 506 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 TIAM2Q8IVF5 1701 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 MIGA1Q8NAN2 632 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 OXER1Q8TDS5 423 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 STRBPQ96SI9 672 aaKnown RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 RIOK1Q9BRS2 568 aaKnown RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 ARMT1Q9H993 441 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 EPB41L4AQ9HCS5 686 aaPredicted RBP9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
DEPDC4-207ENST00000549249 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 PRKAB2O43741 272 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 PRELPP51888 382 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 ANAPC15P60006 121 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 RASSF7Q02833 373 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 COL9A3Q14050 684 aaPredicted RBP9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 TTLL5Q6EMB2 1281 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 DZIP1Q86YF9 867 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 TBC1D22AQ8WUA7 517 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 AIDAQ96BJ3 306 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 MYH1P12882 1939 aa9.68□□□□□ -0.86
DEPDC4-207ENST00000549249 RPAP1Q9BWH6 1393 aaPredicted RBP9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 UTRNP46939 3433 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 GAKO14976 1311 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 MAGEB6P1A0A0J9YX57 407 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 GSG1L2A8MUP6 293 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 IGSF3O75054 1194 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 CYP21A2P08686 494 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 DACT2Q5SW24 774 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 STRIP1Q5VSL9 837 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 LARGE2Q8N3Y3 721 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 VPS33BQ9H267 617 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
DEPDC4-207ENST00000549249 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 FGAP02671 866 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 RABEP1Q15276 862 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 ALX1Q15699 326 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 TMED8Q6PL24 325 aaPredicted RBP9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 STOX1Q6ZVD7 989 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 SDR42E1Q8WUS8 393 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 AATFQ9NY61 560 aaKnown RBP eCLIP9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
DEPDC4-207ENST00000549249 PATL2C9JE40 543 aaKnown RBP9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 F8W031 263 aaPredicted RBP9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 ARHGAP33O14559 1287 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 GSTO1P78417 241 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 IFNL3Q8IZI9 196 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 TBC1D2Q9BYX2 928 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 DAGLAQ9Y4D2 1042 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 SLC4A4Q9Y6R1 1079 aa9.65□□□□□ -0.86
DEPDC4-207ENST00000549249 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 PSMD14O00487 310 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 RAD17O75943 681 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 LDHCP07864 332 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms