RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
USP15-208ENST00000548524 RAI14Q9P0K7 980 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 PCNTO95613 3336 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 THSD7BQ9C0I4 1608 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 TRPA1O75762 1119 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 MCAMP43121 646 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
USP15-208ENST00000548524 GSTO1P78417 241 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 SREBF2Q12772 1141 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 TCP10Q12799 353 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 SPRYD7Q5W111 196 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 ANKRD13AQ8IZ07 590 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 CLMNQ96JQ2 1002 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 RNF186Q9NXI6 227 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 SAGE1Q9NXZ1 904 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 LRP2BPQ9P2M1 347 aa11.65□□□□□ -0.54
USP15-208ENST00000548524 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.55
USP15-208ENST00000548524 GAKO14976 1311 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 APBB1O00213 710 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 SEC24BO95487 1268 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 LDHCP07864 332 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 C7P10643 843 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 BTDP43251 543 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 MECOMQ03112 1051 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 AACSQ86V21 672 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 FAM151AQ8WW52 585 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 EAF2Q96CJ1 260 aaPredicted RBP11.64□□□□□ -0.55
USP15-208ENST00000548524 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
USP15-208ENST00000548524 WNK4Q96J92 1243 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 ELP3Q9H9T3 547 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 SNRKQ9NRH2 765 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 METRNQ9UJH8 293 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
USP15-208ENST00000548524 CSADQ9Y600 493 aa11.64□□□□□ -0.55
USP15-208ENST00000548524 MROH7-TTC4A0A0A0MT08 1334 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
USP15-208ENST00000548524 NFIAQ12857 509 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
USP15-208ENST00000548524 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
USP15-208ENST00000548524 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 IL1RAPL2Q9NP60 686 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
USP15-208ENST00000548524 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
USP15-208ENST00000548524 RAB11FIP3O75154 756 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 PPP1R37O75864 691 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 ZBTB48P10074 688 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 PLCG2P16885 1265 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 ZAP70P43403 619 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 TM4SF4P48230 202 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 RGS3P49796 1198 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 MIGA2Q7L4E1 593 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 SIRT2Q8IXJ6 389 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP15-208ENST00000548524 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 OPTNQ96CV9 577 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 ZNF512BQ96KM6 892 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 WRNIP1Q96S55 665 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 FAM198AQ9UFP1 575 aa11.62□□□□□ -0.55
USP15-208ENST00000548524 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
USP15-208ENST00000548524 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 ENTPD3O75355 529 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 IFIT2P09913 472 aaKnown RBP11.61□□□□□ -0.55
USP15-208ENST00000548524 INHBEP58166 350 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 PICALMQ13492 652 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 VGLL4Q14135 290 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.61□□□□□ -0.55
USP15-208ENST00000548524 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
USP15-208ENST00000548524 TBC1D8O95759 1140 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 BAG3O95817 575 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
USP15-208ENST00000548524 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
USP15-208ENST00000548524 GJA5P36382 358 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
USP15-208ENST00000548524 OTUD7BQ6GQQ9 843 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 ZNF384Q8TF68 577 aa11.6□□□□□ -0.55
USP15-208ENST00000548524 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
USP15-208ENST00000548524 IGSF3O75054 1194 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
USP15-208ENST00000548524 IDH1O75874 414 aaKnown RBP11.59□□□□□ -0.55
USP15-208ENST00000548524 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 RHBDL3P58872 404 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 TEX11Q8IYF3 940 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
USP15-208ENST00000548524 PIH1D3Q9NQM4 214 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms