RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	GART	P22102	1010 aa		8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	DOC2B	Q14184	412 aa		8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	LRFN4	Q6PJG9	635 aa		8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	BNC2	Q6ZN30	1099 aa	Predicted RBP	8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	JARID2	Q92833	1246 aa	Predicted RBP	8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	MYRFL	Q96LU7	910 aa		8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	FANCD2OS	Q96PS1	177 aa		8.72	□□□□□ -1.01
LEMD3-205	ENST00000544506	F13A1	P00488	732 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	EIF4A3	P38919	411 aa	Known RBP	8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	CDK8	P49336	464 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	RACK1	P63244	317 aa	Known RBP	8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	INPP5A	Q14642	412 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	SGO2	Q562F6	1265 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	FBXL19	Q6PCT2	694 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	CCDC84	Q86UT8	332 aa	Predicted RBP	8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	GOLM1	Q8NBJ4	401 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	ELMO3	Q96BJ8	720 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	PLPPR2	Q96GM1	343 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	ATXN3L	Q9H3M9	355 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	GSX1	Q9H4S2	264 aa	Predicted RBP	8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	KCNQ5	Q9NR82	932 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	IGSF5	Q9NSI5	407 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	FAM105A	Q9NUU6	356 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	ADAMTS1	Q9UHI8	967 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	CSAD	Q9Y600	493 aa		8.71	□□□□□ -1.02
LEMD3-205	ENST00000544506	IGHA1	P01876	353 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	BMP3	P12645	472 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	ERVK-24	P63145	666 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	RAD51AP2	Q09MP3	1159 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	WIPI1	Q5MNZ9	446 aa	Predicted RBP	8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	GATAD2B	Q8WXI9	593 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	DISC1	Q9NRI5	854 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	DDX41	Q9UJV9	622 aa	Known RBP	8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	HIF3A	Q9Y2N7	669 aa		8.7	□□□□□ -1.02
LEMD3-205	ENST00000544506	FAM221A	A4D161	298 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	ASPA	P45381	313 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	USP11	P51784	963 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	PPM1J	Q5JR12	505 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	CDPF1	Q6NVV7	123 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	NPM2	Q86SE8	214 aa	Known RBP	8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	C12orf40	Q86WS4	652 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	FAM20C	Q8IXL6	584 aa		8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	ZNF296	Q8WUU4	475 aa	Predicted RBP	8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	SUPT16H	Q9Y5B9	1047 aa	Known RBP	8.69	□□□□□ -1.02
LEMD3-205	ENST00000544506	DHX15	O43143	795 aa	Known RBP	8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	CILP	O75339	1184 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	RAB6A	P20340	208 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	RPL6	Q02878	288 aa	Known RBP	8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	TTLL4	Q14679	1199 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	ZNF654	Q8IZM8	581 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	PIDD1	Q9HB75	910 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	SNCAIP	Q9Y6H5	919 aa		8.68	□□□□□ -1.02
LEMD3-205	ENST00000544506	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	PRAMEF27	A3QJZ7	478 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	GREM1	O60565	184 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	NEFM	P07197	916 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	HCLS1	P14317	486 aa	Predicted RBP	8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	MAP4	P27816	1152 aa	Known RBP	8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	ERCC5	P28715	1186 aa	Predicted RBP	8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	RING1	Q06587	406 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	PRR23C	Q6ZRP0	262 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	FAM196A	Q6ZSG2	479 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	CYFIP1	Q7L576	1253 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	HDX	Q7Z353	690 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	KIAA0825	Q8IV33	1275 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	FBXO27	Q8NI29	283 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	FBLIM1	Q8WUP2	373 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	SPON2	Q9BUD6	331 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	KCNF1	Q9H3M0	494 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	ACSS3	Q9H6R3	686 aa		8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	8.67	□□□□□ -1.02
LEMD3-205	ENST00000544506	GFRA2	O00451	464 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	BPNT1	O95861	308 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	RXRB	P28702	533 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	DIEXF	Q68CQ4	756 aa	Known RBP	8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	RNF214	Q8ND24	703 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	EZH1	Q92800	747 aa	Predicted RBP	8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	YIPF2	Q9BWQ6	316 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	TGIF2	Q9GZN2	237 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	PICK1	Q9NRD5	415 aa		8.66	□□□□□ -1.02
LEMD3-205	ENST00000544506	TLR3	O15455	904 aa	Known RBP	8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	NTF4	P34130	210 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	CRK	P46108	304 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	MPP2	Q14168	576 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	RSPO4	Q2I0M5	234 aa	Predicted RBP	8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	NKAPL	Q5M9Q1	402 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	ZBTB37	Q5TC79	503 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	BEND4	Q6ZU67	534 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	EAF1	Q96JC9	268 aa	Predicted RBP	8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	SEMA6C	Q9H3T2	930 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	UBP1	Q9NZI7	540 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	RAX	Q9Y2V3	346 aa		8.65	□□□□□ -1.02
LEMD3-205	ENST00000544506	RNGTT	O60942	597 aa	Known RBP	8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	SMYD4	Q8IYR2	804 aa	Predicted RBP	8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	ISL2	Q96A47	359 aa		8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	LRRC3	Q9BY71	257 aa		8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	ACBD3	Q9H3P7	528 aa		8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	CCSER2	Q9H7U1	834 aa		8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	DAGLA	Q9Y4D2	1042 aa		8.64	□□□□□ -1.03
LEMD3-205	ENST00000544506	FAM95C	A0A1B0GW59	222 aa		8.63	□□□□□ -1.03

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