RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 OTOFQ9HC10 1997 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MANSC4A6NHS7 340 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RAB11FIP3O75154 756 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TCP10Q12799 353 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 DBNLQ9UJU6 430 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 LAMB1P07942 1786 aa11.92□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 IGSF3O75054 1194 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ENTPD3O75355 529 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MAP4K4O95819 1239 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 NFIAQ12857 509 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 AACSQ86V21 672 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 KIF1BPQ96EK5 621 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZNF341Q9BYN7 854 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CSADQ9Y600 493 aa11.91□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 BTDP43251 543 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RGS3P49796 1198 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MIGA2Q7L4E1 593 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZFPM1Q8IX07 1006 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CLASRPQ8N2M8 674 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CDK5RAP2Q96SN8 1893 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 IL1RAPL2Q9NP60 686 aa11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RPAP1Q9BWH6 1393 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-214ENST00000543048 APBB1O00213 710 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZAP70P43403 619 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 VGLL4Q14135 290 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 OPTNQ96CV9 577 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZNF112Q9UJU3 913 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
TNFRSF1A-214ENST00000543048 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TBC1D8O95759 1140 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 BAG3O95817 575 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 GJA5P36382 358 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 RHBDL3P58872 404 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZSCAN29Q8IWY8 852 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 GTF2A2P52657 109 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PPP4CP60510 307 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PICALMQ13492 652 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PIH1D3Q9NQM4 214 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MYH1P12882 1939 aa11.87□□□□□ -0.51
TNFRSF1A-214ENST00000543048 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 DDTLA6NHG4 134 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PLCG2P16885 1265 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 INPP5BP32019 993 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PPATQ06203 517 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MAST2Q6P0Q8 1798 aa11.86□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PHF20L1A8MW92 1017 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 GPR25O00155 361 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TBC1D12O60347 775 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 CYP7A1P22680 504 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 RRP1P56182 461 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PPIL2Q13356 520 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms