RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 LUC7L2Q9Y383 392 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ERLIN2O94905 339 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 CCT6AP40227 531 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 UBXN1Q04323 297 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 CT47A1Q5JQC4 288 aaPredicted RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 TSG101Q99816 390 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 PUS3Q9BZE2 481 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 PPLO60437 1756 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 KRT86O43790 486 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 PHACTR2O75167 634 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 MCM7P33993 719 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 GNAQP50148 359 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 DNA2P51530 1060 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 SLC4A8Q2Y0W8 1093 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 LPIN2Q92539 896 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ZBTB9Q96C00 473 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ANKIB1Q9P2G1 1089 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 MAST3O60307 1309 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 RTL9Q8NET4 1388 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 ADKP55263 362 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 KRT83P78385 493 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 CKAP4Q07065 602 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 ENOX2Q16206 610 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 ALS2CR12Q96Q35 445 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 VPS16Q9H269 839 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 NIP7Q9Y221 180 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 PDE8AO60658 829 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 CHMP4BP1P59074 171 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 AKNAD1Q5T1N1 836 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 BTBD18B2RXH4 712 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 BAG3O95817 575 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 RDXP35241 583 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 KIF5AQ12840 1032 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 OSBP2Q969R2 916 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 CLIC6Q96NY7 704 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 SH3TC1Q8TE82 1336 aa9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 RPAP1Q9BWH6 1393 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-207ENST00000542698 NUTM2BA6NNL0 878 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 NUTM2EB1AL46 878 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 DMTNQ08495 405 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 SYCP1Q15431 976 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC178Q5BJE1 867 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 SARM1Q6SZW1 724 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 HDXQ7Z353 690 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 VPS18Q9P253 973 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 ZPR1O75312 459 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 LDHCP07864 332 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 PPP2R5BQ15173 497 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC96Q2M329 555 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 TSGA10IPQ3SY00 556 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 DTHD1Q6ZMT9 781 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 DDX17Q92841 729 aaKnown RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC42Q96M95 316 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 AGLP35573 1532 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 IVLP07476 585 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 USP8P40818 1118 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 TUBB2AQ13885 445 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 SPTY2D1Q68D10 685 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 TUBB2BQ9BVA1 445 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 CAMSAP1Q5T5Y3 1602 aa9.29□□□□□ -0.92
PRKAB1-207ENST00000542698 ZMYM6O95789 1325 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 IKBKBO14920 756 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ADORA1P30542 326 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 KRT9P35527 623 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ASIC1P78348 528 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 RBM28Q9NW13 759 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 MAPK8IP1Q9UQF2 711 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 AK9Q5TCS8 1911 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 PRDM1O75626 825 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 CIAO1O76071 339 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 PDE6AP16499 860 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC40Q4G0X9 1142 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 TMTC1Q8IUR5 882 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms