RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.33
DDX55-209ENST00000542286 FBXL16Q8N461 479 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 ANKRD7Q92527 254 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
DDX55-209ENST00000542286 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
DDX55-209ENST00000542286 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
DDX55-209ENST00000542286 NUP133Q8WUM0 1156 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
DDX55-209ENST00000542286 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
DDX55-209ENST00000542286 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
DDX55-209ENST00000542286 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 NTRK3Q16288 839 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
DDX55-209ENST00000542286 BECN2A8MW95 431 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 CYP7A1P22680 504 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 STX1AQ16623 288 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 ADALQ6DHV7 355 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
DDX55-209ENST00000542286 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 SLC12A7Q9Y666 1083 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
DDX55-209ENST00000542286 PFKFB1P16118 471 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 IARSP41252 1262 aaKnown RBP17.11■□□□□ 0.33
DDX55-209ENST00000542286 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
DDX55-209ENST00000542286 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
DDX55-209ENST00000542286 GRIN1Q05586 938 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 MFSD6Q6ZSS7 791 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 ATRNO75882 1429 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 ZNF202O95125 648 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 C16orf45Q96MC5 204 aaPredicted RBP17.11■□□□□ 0.33
DDX55-209ENST00000542286 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
DDX55-209ENST00000542286 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 BTBD18B2RXH4 712 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 CTIFO43310 598 aaKnown RBP17.1■□□□□ 0.33
DDX55-209ENST00000542286 NR5A1Q13285 461 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 FEZ1Q99689 392 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
DDX55-209ENST00000542286 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
DDX55-209ENST00000542286 FOXN1O15353 648 aa17.09■□□□□ 0.33
DDX55-209ENST00000542286 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
DDX55-209ENST00000542286 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
DDX55-209ENST00000542286 ZNF384Q8TF68 577 aa17.09■□□□□ 0.33
DDX55-209ENST00000542286 SHC4Q6S5L8 630 aa17.09■□□□□ 0.33
DDX55-209ENST00000542286 FAM205CA6NFA0 338 aa17.08■□□□□ 0.33
DDX55-209ENST00000542286 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.33
DDX55-209ENST00000542286 OXER1Q8TDS5 423 aa17.08■□□□□ 0.33
DDX55-209ENST00000542286 C8orf37Q96NL8 207 aa17.08■□□□□ 0.33
DDX55-209ENST00000542286 DDX60Q8IY21 1712 aaKnown RBP17.08■□□□□ 0.33
DDX55-209ENST00000542286 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 USP27XA6NNY8 438 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 PNOCQ13519 176 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 OGFRQ9NZT2 677 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
DDX55-209ENST00000542286 PLCH1Q4KWH8 1693 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
DDX55-209ENST00000542286 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
DDX55-209ENST00000542286 NMT2O60551 498 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 YEATS4O95619 227 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
DDX55-209ENST00000542286 PPARAQ07869 468 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 WTAPQ15007 396 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 SHISA4Q96DD7 197 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX55-209ENST00000542286 LRP5O75197 1615 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 CTAGE5O15320 804 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 SLC39A14Q15043 492 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 PTPAQ15257 358 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 A0A1W2PQ27 194 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 A0A1W2PQ64 194 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 A0A1W2PQD8 194 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 TPM3P06753 285 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
DDX55-209ENST00000542286 ATL3Q6DD88 541 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 TMEM51Q9NW97 253 aa17.06■□□□□ 0.32
DDX55-209ENST00000542286 BAZ2AQ9UIF9 1905 aaKnown RBP17.05■□□□□ 0.32
DDX55-209ENST00000542286 ATP1A3P13637 1013 aa17.05■□□□□ 0.32
DDX55-209ENST00000542286 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
DDX55-209ENST00000542286 NCBP1Q09161 790 aaKnown RBP17.05■□□□□ 0.32
DDX55-209ENST00000542286 RTN1Q16799 776 aa17.05■□□□□ 0.32
DDX55-209ENST00000542286 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms