RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 NPATQ14207 1427 aa12.4□□□□□ -0.42
MRPS35-204ENST00000542199 ILDR2Q71H61 639 aa12.4□□□□□ -0.42
MRPS35-204ENST00000542199 TRIM11Q96F44 468 aa12.4□□□□□ -0.42
MRPS35-204ENST00000542199 DHX29Q7Z478 1369 aaKnown RBP12.4□□□□□ -0.42
MRPS35-204ENST00000542199 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
MRPS35-204ENST00000542199 LINC00114Q6XXX2 140 aa12.39□□□□□ -0.43
MRPS35-204ENST00000542199 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
MRPS35-204ENST00000542199 ZSCAN1Q8NBB4 408 aa12.39□□□□□ -0.43
MRPS35-204ENST00000542199 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
MRPS35-204ENST00000542199 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
MRPS35-204ENST00000542199 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
MRPS35-204ENST00000542199 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
MRPS35-204ENST00000542199 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
MRPS35-204ENST00000542199 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
MRPS35-204ENST00000542199 FSCN2O14926 492 aa12.37□□□□□ -0.43
MRPS35-204ENST00000542199 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
MRPS35-204ENST00000542199 GGT6Q6P531 493 aa12.37□□□□□ -0.43
MRPS35-204ENST00000542199 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
MRPS35-204ENST00000542199 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
MRPS35-204ENST00000542199 PCDHGB7Q9Y5F8 929 aa12.37□□□□□ -0.43
MRPS35-204ENST00000542199 ADGBQ8N7X0 1667 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 ARHGEF5Q12774 1597 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 DEAF1O75398 565 aaPredicted RBP12.36□□□□□ -0.43
MRPS35-204ENST00000542199 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 GALNT11Q8NCW6 608 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 STK35Q8TDR2 534 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
MRPS35-204ENST00000542199 TM4SF5O14894 197 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 KBTBD4Q9NVX7 518 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
MRPS35-204ENST00000542199 GSTM4Q03013 218 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 C19orf57Q0VDD7 668 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 KLHDC7BQ96G42 594 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 PLVAPQ9BX97 442 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 PTPRTO14522 1441 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 MYOM3Q5VTT5 1437 aa12.34□□□□□ -0.43
MRPS35-204ENST00000542199 FAM229AH3BQW9 127 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
MRPS35-204ENST00000542199 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 TLR6Q9Y2C9 796 aa12.33□□□□□ -0.44
MRPS35-204ENST00000542199 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
MRPS35-204ENST00000542199 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 KIF3BO15066 747 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 LIG3P49916 1009 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 SULF2Q8IWU5 870 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 WNT8BQ93098 351 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 SOX17Q9H6I2 414 aaPredicted RBP12.32□□□□□ -0.44
MRPS35-204ENST00000542199 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
MRPS35-204ENST00000542199 GNB5O14775 395 aa12.31□□□□□ -0.44
MRPS35-204ENST00000542199 DDX3YO15523 660 aaKnown RBP12.31□□□□□ -0.44
MRPS35-204ENST00000542199 ECEL1O95672 775 aa12.31□□□□□ -0.44
MRPS35-204ENST00000542199 RACK1P63244 317 aaKnown RBP12.31□□□□□ -0.44
MRPS35-204ENST00000542199 FOXD4L6Q3SYB3 417 aaPredicted RBP12.31□□□□□ -0.44
MRPS35-204ENST00000542199 FOXD4L3Q6VB84 417 aaPredicted RBP12.31□□□□□ -0.44
MRPS35-204ENST00000542199 NRSN2Q9GZP1 204 aa12.31□□□□□ -0.44
MRPS35-204ENST00000542199 MKL2Q9ULH7 1088 aa12.31□□□□□ -0.44
MRPS35-204ENST00000542199 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
MRPS35-204ENST00000542199 ADAM11O75078 769 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 BMP6P22004 513 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 NLRP12P59046 1061 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 SRA1Q9HD15 236 aaKnown RBP12.3□□□□□ -0.44
MRPS35-204ENST00000542199 OSGEPQ9NPF4 335 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 KCNK4Q9NYG8 393 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
MRPS35-204ENST00000542199 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
MRPS35-204ENST00000542199 KDM5DQ9BY66 1539 aa12.29□□□□□ -0.44
MRPS35-204ENST00000542199 NME2P22392 152 aa12.29□□□□□ -0.44
MRPS35-204ENST00000542199 ARL4DP49703 201 aa12.29□□□□□ -0.44
MRPS35-204ENST00000542199 FMR1NBQ8N0W7 255 aaPredicted RBP12.29□□□□□ -0.44
MRPS35-204ENST00000542199 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
MRPS35-204ENST00000542199 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
MRPS35-204ENST00000542199 PZPP20742 1482 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 PLA2R1Q13018 1463 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 CTSBP07858 339 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
MRPS35-204ENST00000542199 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
MRPS35-204ENST00000542199 GRIN3AQ8TCU5 1115 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 TMEM74Q96NL1 305 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 WASHC2CQ9Y4E1 1318 aa12.28□□□□□ -0.44
MRPS35-204ENST00000542199 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.44
MRPS35-204ENST00000542199 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.45
MRPS35-204ENST00000542199 MINDY4BA8MYZ0 360 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
MRPS35-204ENST00000542199 PDZD3Q86UT5 571 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms