RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 GBA2Q9HCG7 927 aaPredicted RBP23.45■■□□□ 1.34
DDX55-207ENST00000540763 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
DDX55-207ENST00000540763 MIGA1Q8NAN2 632 aa23.44■■□□□ 1.34
DDX55-207ENST00000540763 APPBP2Q92624 585 aa23.44■■□□□ 1.34
DDX55-207ENST00000540763 VEGFBP49765 207 aa23.43■■□□□ 1.34
DDX55-207ENST00000540763 DYNLL1P63167 89 aaKnown RBP23.43■■□□□ 1.34
DDX55-207ENST00000540763 TTC22Q5TAA0 569 aa23.43■■□□□ 1.34
DDX55-207ENST00000540763 PRAMEF18Q5VWM3 479 aa23.43■■□□□ 1.34
DDX55-207ENST00000540763 HHIPL1Q96JK4 782 aa23.43■■□□□ 1.34
DDX55-207ENST00000540763 DDX4Q9NQI0 724 aaKnown RBP23.43■■□□□ 1.34
DDX55-207ENST00000540763 TLL2Q9Y6L7 1015 aa23.43■■□□□ 1.34
DDX55-207ENST00000540763 FOXN1O15353 648 aa23.42■■□□□ 1.34
DDX55-207ENST00000540763 TCP10Q12799 353 aa23.42■■□□□ 1.34
DDX55-207ENST00000540763 MAP3K11Q16584 847 aa23.42■■□□□ 1.34
DDX55-207ENST00000540763 NBPF12Q5TAG4 269 aaPredicted RBP23.42■■□□□ 1.34
DDX55-207ENST00000540763 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
DDX55-207ENST00000540763 SIPA1L1O43166 1804 aa23.42■■□□□ 1.34
DDX55-207ENST00000540763 FLT1P17948 1338 aa23.41■■□□□ 1.34
DDX55-207ENST00000540763 TRIM6-TRIM34B2RNG4 842 aa23.41■■□□□ 1.34
DDX55-207ENST00000540763 PPP1R12BO60237 982 aaPredicted RBP23.41■■□□□ 1.34
DDX55-207ENST00000540763 PICALMQ13492 652 aa23.41■■□□□ 1.34
DDX55-207ENST00000540763 SAPCD2Q86UD0 394 aa23.41■■□□□ 1.34
DDX55-207ENST00000540763 AIDAQ96BJ3 306 aa23.41■■□□□ 1.34
DDX55-207ENST00000540763 CRNKL1Q9BZJ0 848 aaKnown RBP23.41■■□□□ 1.34
DDX55-207ENST00000540763 UNCXA6NJT0 531 aa23.4■■□□□ 1.34
DDX55-207ENST00000540763 ZMYM1Q5SVZ6 1142 aa23.4■■□□□ 1.34
DDX55-207ENST00000540763 ARMC9Q7Z3E5 817 aa23.4■■□□□ 1.34
DDX55-207ENST00000540763 LAMB1P07942 1786 aa23.4■■□□□ 1.34
DDX55-207ENST00000540763 BAZ2AQ9UIF9 1905 aaKnown RBP23.39■■□□□ 1.34
DDX55-207ENST00000540763 RASSF10A6NK89 507 aa23.39■■□□□ 1.33
DDX55-207ENST00000540763 MBD4O95243 580 aa23.39■■□□□ 1.33
DDX55-207ENST00000540763 DCAF15Q66K64 600 aa23.39■■□□□ 1.33
DDX55-207ENST00000540763 LCORLQ8N3X6 602 aa23.39■■□□□ 1.33
DDX55-207ENST00000540763 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.33
DDX55-207ENST00000540763 PUS7LQ9H0K6 701 aaKnown RBP23.39■■□□□ 1.33
DDX55-207ENST00000540763 DHX36Q9H2U1 1008 aaKnown RBP23.39■■□□□ 1.33
DDX55-207ENST00000540763 ABT1Q9ULW3 272 aaKnown RBP23.39■■□□□ 1.33
DDX55-207ENST00000540763 CHGBP05060 677 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 GSPT1P15170 499 aaKnown RBP23.38■■□□□ 1.33
DDX55-207ENST00000540763 USP5P45974 858 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 DEFB115Q30KQ5 88 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 SLFNL1Q499Z3 407 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 CDAN1Q8IWY9 1227 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 OSBP2Q969R2 916 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
DDX55-207ENST00000540763 THSD7BQ9C0I4 1608 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 HIP1O00291 1037 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 CTCFP49711 727 aaPredicted RBP23.37■■□□□ 1.33
DDX55-207ENST00000540763 SH3BP5LQ7L8J4 393 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 ZSCAN29Q8IWY8 852 aaPredicted RBP23.37■■□□□ 1.33
DDX55-207ENST00000540763 ZFPM1Q8IX07 1006 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 CSRNP1Q96S65 589 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 ARMT1Q9H993 441 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 PRDM10Q9NQV6 1147 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 ATP8A2Q9NTI2 1148 aa23.37■■□□□ 1.33
DDX55-207ENST00000540763 DDTLA6NHG4 134 aaPredicted RBP23.36■■□□□ 1.33
DDX55-207ENST00000540763 GNAT2P19087 354 aa23.36■■□□□ 1.33
DDX55-207ENST00000540763 IREB2P48200 963 aaKnown RBP23.36■■□□□ 1.33
DDX55-207ENST00000540763 MAP3K10Q02779 954 aa23.36■■□□□ 1.33
DDX55-207ENST00000540763 MAPKAPK5Q8IW41 473 aa23.36■■□□□ 1.33
DDX55-207ENST00000540763 HELLSQ9NRZ9 838 aa23.36■■□□□ 1.33
DDX55-207ENST00000540763 DOCK1Q14185 1865 aa23.35■■□□□ 1.33
DDX55-207ENST00000540763 TBC1D12O60347 775 aa23.35■■□□□ 1.33
DDX55-207ENST00000540763 HUNKP57058 714 aa23.35■■□□□ 1.33
DDX55-207ENST00000540763 TTLL12Q14166 644 aaPredicted RBP23.35■■□□□ 1.33
DDX55-207ENST00000540763 STRBPQ96SI9 672 aaKnown RBP23.35■■□□□ 1.33
DDX55-207ENST00000540763 WBP1LQ9NX94 342 aa23.35■■□□□ 1.33
DDX55-207ENST00000540763 ANGEL1Q9UNK9 670 aaKnown RBP23.35■■□□□ 1.33
DDX55-207ENST00000540763 ATAD5Q96QE3 1844 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 MYH8P13535 1937 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 GPAA1O43292 621 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 USP2O75604 605 aaPredicted RBP23.34■■□□□ 1.33
DDX55-207ENST00000540763 SDSP20132 328 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 LDLRAD1Q5T700 205 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 TAOK2Q9UL54 1235 aa23.34■■□□□ 1.33
DDX55-207ENST00000540763 M0R2C6 588 aa23.33■■□□□ 1.33
DDX55-207ENST00000540763 HLA-DOAP06340 250 aa23.33■■□□□ 1.33
DDX55-207ENST00000540763 GIMAP6Q6P9H5 292 aa23.33■■□□□ 1.33
DDX55-207ENST00000540763 DDRGK1Q96HY6 314 aa23.33■■□□□ 1.33
DDX55-207ENST00000540763 DCP1AQ9NPI6 582 aaPredicted RBP23.33■■□□□ 1.33
DDX55-207ENST00000540763 PI4KBQ9UBF8 816 aa23.33■■□□□ 1.33
DDX55-207ENST00000540763 HERC5Q9UII4 1024 aaKnown RBP23.33■■□□□ 1.33
DDX55-207ENST00000540763 WDR33Q9C0J8 1336 aaKnown RBP23.33■■□□□ 1.32
DDX55-207ENST00000540763 BMP2KLQ5H9B9 411 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 METTL16Q86W50 562 aaKnown RBP23.32■■□□□ 1.32
DDX55-207ENST00000540763 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.32■■□□□ 1.32
DDX55-207ENST00000540763 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 EHD4Q9H223 541 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 ZNF112Q9UJU3 913 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 SLC4A4Q9Y6R1 1079 aa23.32■■□□□ 1.32
DDX55-207ENST00000540763 ECE1P42892 770 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 MAP2K1Q02750 393 aaPredicted RBP23.31■■□□□ 1.32
DDX55-207ENST00000540763 PRKG1Q13976 671 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 MCMDC2Q4G0Z9 681 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 RGMBQ6NW40 437 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 MOB2Q70IA6 237 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms