RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 DPCR1Q3MIW9 517 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 ERFEQ4G0M1 354 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 NAPBQ9H115 298 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 ALX1Q15699 326 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 FILIP1Q7Z7B0 1213 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-214ENST00000540113 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-214ENST00000540113 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 PATL2C9JE40 543 aaKnown RBP13.37□□□□□ -0.27
C11orf54-214ENST00000540113 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
C11orf54-214ENST00000540113 ZBTB43O43298 467 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
C11orf54-214ENST00000540113 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 CLIC6Q96NY7 704 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 ANO10Q9NW15 660 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 COL1A1P02452 1464 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-214ENST00000540113 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 ZNF202O95125 648 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 PFKFB1P16118 471 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-214ENST00000540113 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 SLC26A6Q9BXS9 759 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 ZNF652Q9Y2D9 606 aa13.37□□□□□ -0.27
C11orf54-214ENST00000540113 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
C11orf54-214ENST00000540113 NTRK3Q16288 839 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
C11orf54-214ENST00000540113 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 SLC4A4Q9Y6R1 1079 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 BTAF1O14981 1849 aa13.36□□□□□ -0.27
C11orf54-214ENST00000540113 A0A1W2PQ27 194 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 A0A1W2PQ64 194 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 YEATS4O95619 227 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
C11orf54-214ENST00000540113 TDO2P48775 406 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-214ENST00000540113 ADGRA1Q86SQ6 560 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 ABCF2Q9UG63 623 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 COL24A1Q17RW2 1714 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
C11orf54-214ENST00000540113 GYG1P46976 350 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 CACNA1SQ13698 1873 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 SLC3A2P08195 630 aaKnown RBP13.34□□□□□ -0.27
C11orf54-214ENST00000540113 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
C11orf54-214ENST00000540113 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 SARM1Q6SZW1 724 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
C11orf54-214ENST00000540113 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
C11orf54-214ENST00000540113 MINDY4BA8MYZ0 360 aa13.33□□□□□ -0.27
C11orf54-214ENST00000540113 CAVIN2O95810 425 aa13.33□□□□□ -0.27
C11orf54-214ENST00000540113 SLC39A14Q15043 492 aa13.33□□□□□ -0.27
C11orf54-214ENST00000540113 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.27
C11orf54-214ENST00000540113 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.27
C11orf54-214ENST00000540113 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 NUP133Q8WUM0 1156 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
C11orf54-214ENST00000540113 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.28
C11orf54-214ENST00000540113 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 AFF2P51816 1311 aa13.33□□□□□ -0.28
C11orf54-214ENST00000540113 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 BTBD18B2RXH4 712 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CDKL5O76039 1030 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CYP7A1P22680 504 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CMA1P23946 247 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CDC25BP30305 580 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 PNOCQ13519 176 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 PTPAQ15257 358 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms