RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ZNF333Q96JL9 665 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 IGFBP4P22692 258 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 INPP5BP32019 993 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 ZCCHC17Q9NP64 241 aaKnown RBP9.25□□□□□ -0.93
GNE-205ENST00000539815 HMGCRP04035 888 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 PRKCZQ05513 592 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 TTC39AQ5SRH9 613 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 CYP2C8P10632 490 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
GNE-205ENST00000539815 MICALL1Q8N3F8 863 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
GNE-205ENST00000539815 TOGARAM1Q9Y4F4 1720 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 CHRM1P11229 460 aaPredicted RBP9.24□□□□□ -0.93
GNE-205ENST00000539815 ANKRD23Q86SG2 305 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 FAM83AQ86UY5 434 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 TXNRD3Q86VQ6 643 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 R3HDMLQ9H3Y0 253 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 C11orf49Q9H6J7 331 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
GNE-205ENST00000539815 EP400NLQ6ZTU2 488 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 TRMT44Q8IYL2 757 aaKnown RBP9.24□□□□□ -0.93
GNE-205ENST00000539815 LPIN2Q92539 896 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 FRAT1Q92837 279 aaPredicted RBP9.24□□□□□ -0.93
GNE-205ENST00000539815 GMLQ99445 158 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.24□□□□□ -0.93
GNE-205ENST00000539815 RAG1P15918 1043 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 RGS2P41220 211 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 MTMR14Q8NCE2 650 aa9.24□□□□□ -0.93
GNE-205ENST00000539815 SENP6Q9GZR1 1112 aaPredicted RBP9.24□□□□□ -0.93
GNE-205ENST00000539815 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
GNE-205ENST00000539815 API5Q9BZZ5 524 aaKnown RBP9.23□□□□□ -0.93
GNE-205ENST00000539815 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
GNE-205ENST00000539815 H7C1W4 665 aa9.23□□□□□ -0.93
GNE-205ENST00000539815 IGSF3O75054 1194 aa9.23□□□□□ -0.93
GNE-205ENST00000539815 CHMP4BP1P59074 171 aa9.23□□□□□ -0.93
GNE-205ENST00000539815 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
GNE-205ENST00000539815 FKBP1AP62942 108 aaKnown RBP9.23□□□□□ -0.93
GNE-205ENST00000539815 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
GNE-205ENST00000539815 ASNSP08243 561 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 GJA8P48165 433 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 RAB3GAP1Q15042 981 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 SCYL3Q8IZE3 742 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 GPRC5AQ8NFJ5 357 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 DDX11Q96FC9 970 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 ANKRD26Q9UPS8 1709 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 FOSL2P15408 326 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
GNE-205ENST00000539815 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.22□□□□□ -0.93
GNE-205ENST00000539815 GTF3C2Q8WUA4 911 aaPredicted RBP9.22□□□□□ -0.93
GNE-205ENST00000539815 SOCS4Q8WXH5 440 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 CNPY2Q9Y2B0 182 aa9.22□□□□□ -0.93
GNE-205ENST00000539815 TMEM265A0A087WTH1 108 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 MSCO60682 206 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 IDH1O75874 414 aaKnown RBP9.21□□□□□ -0.93
GNE-205ENST00000539815 FXR1P51114 621 aaKnown RBP eCLIP9.21□□□□□ -0.93
GNE-205ENST00000539815 HMGCS2P54868 508 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 CACNA1GO43497 2377 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 SBF1O95248 1867 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 GNAI3P08754 354 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 NOD1Q9Y239 953 aa9.21□□□□□ -0.93
GNE-205ENST00000539815 PDE8BO95263 885 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 HHIPL2Q6UWX4 724 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 G2E3Q7L622 706 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 UIMC1Q96RL1 719 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 PLEKHF1Q96S99 279 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 SH2D4AQ9H788 454 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 RPTORQ8N122 1335 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 TIAM2Q8IVF5 1701 aa9.21□□□□□ -0.94
GNE-205ENST00000539815 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 MAPK4P31152 587 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 IL15P40933 162 aaPredicted RBP9.2□□□□□ -0.94
GNE-205ENST00000539815 FKBP1CQ5VVH2 108 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 TDRD7Q8NHU6 1098 aaKnown RBP9.2□□□□□ -0.94
GNE-205ENST00000539815 EYA2O00167 538 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
GNE-205ENST00000539815 KLRK1P26718 216 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 ZNF280CQ8ND82 737 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.2□□□□□ -0.94
GNE-205ENST00000539815 ARHGAP39Q9C0H5 1083 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 A0A1W2PPC1 479 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 UQCRFS1P1P0C7P4 283 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 BTDP43251 543 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 USP14P54578 494 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 TDHQ8IZJ6 230 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 TSPYL6Q8N831 410 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 FAM84BQ96KN1 310 aaPredicted RBP9.2□□□□□ -0.94
GNE-205ENST00000539815 NCOR1O75376 2440 aa9.2□□□□□ -0.94
GNE-205ENST00000539815 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms