RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 SPECC1Q5M775 1068 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 TTC19Q6DKK2 380 aaPredicted RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 NCAPH2Q6IBW4 605 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 NUTM2AQ8IVF1 878 aaPredicted RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 OTUD6BQ8N6M0 293 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 CAGE1Q8TC20 777 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 ATRIPQ8WXE1 791 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 CLIC6Q96NY7 704 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 HINFPQ9BQA5 517 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.16□□□□□ -1.58
PLS3-209ENST00000539310 INTS13Q9NVM9 706 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 DACH1Q9UI36 760 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 SAMM50Q9Y512 469 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 ADGRG1Q9Y653 693 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 MED23Q9ULK4 1368 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 E7EWF7 191 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 GRM8O00222 908 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 CPP00450 1065 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 ACEP12821 1306 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 FDPSP14324 419 aaKnown RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 GGCXP38435 758 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 SLC39A14Q15043 492 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 FILIP1LQ4L180 1135 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 RAD9BQ6WBX8 426 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 ABCA9Q8IUA7 1624 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 LMTK2Q8IWU2 1503 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 HS6ST3Q8IZP7 471 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 MSL3Q8N5Y2 521 aaKnown RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 KAT2BQ92831 832 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 ZNF274Q96GC6 653 aaPredicted RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 SUCLG2Q96I99 432 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 CAPZA3Q96KX2 299 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 NEUROD6Q96NK8 337 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.16□□□□□ -1.58
PLS3-209ENST00000539310 DNAJC5Q9H3Z4 198 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 KAT14Q9H8E8 782 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 SNRKQ9NRH2 765 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 SAMSN1Q9NSI8 373 aaKnown RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 BSDC1Q9NW68 430 aaPredicted RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 DBF4Q9UBU7 674 aaPredicted RBP5.16□□□□□ -1.58
PLS3-209ENST00000539310 IFT172Q9UG01 1749 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 TUBE1Q9UJT0 475 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 KCNH3Q9ULD8 1083 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 MYO6Q9UM54 1294 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 GUCA1BQ9UMX6 200 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 MROH1Q8NDA8 1641 aa5.16□□□□□ -1.58
PLS3-209ENST00000539310 KLF18A0A0U1RQI7 1052 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 GOLGA6BA6NDN3 693 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 NDUFAB1O14561 156 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 HAND2P61296 217 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 PDE4BQ07343 736 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 RBL2Q08999 1139 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 CCDC70Q6NSX1 233 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 RPAINQ86UA6 219 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 ARHGEF25Q86VW2 580 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 ACRBPQ8NEB7 543 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 ZNF526Q8TF50 670 aaPredicted RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 RUFY1Q96T51 708 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 CAPS2Q9BXY5 557 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 GPHNQ9NQX3 736 aaPredicted RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 TTF2Q9UNY4 1162 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 MROH7-TTC4A0A0A0MT08 1334 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 GOLIM4O00461 696 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 PES1O00541 588 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 ENC1O14682 589 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 ZEB2O60315 1214 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 SYF2O95926 243 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 CD44P16070 742 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 CDC27P30260 824 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 NF2P35240 595 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 IRAK1P51617 712 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 CDR1P51861 262 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 STX17P56962 302 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 GNGT1P63211 74 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 TRDNQ13061 729 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 TBX2Q13207 712 aaPredicted RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 TRIM29Q14134 588 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 HSP90AB3PQ58FF7 597 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 RNF187Q5TA31 235 aaPredicted RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 SHC4Q6S5L8 630 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 RALYLQ86SE5 291 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 USHBP1Q8N6Y0 703 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 NGDNQ8NEJ9 315 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 CABS1Q96KC9 395 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 PANX2Q96RD6 677 aa5.15□□□□□ -1.58
PLS3-209ENST00000539310 NAA15Q9BXJ9 866 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 MAP2P11137 1827 aaKnown RBP5.15□□□□□ -1.58
PLS3-209ENST00000539310 PPLO60437 1756 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 NEXMIFQ5QGS0 1516 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 NEDD4P46934 1319 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 BTBD11A6QL63 1104 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 KIF28PB7ZC32 967 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 FOXN1O15353 648 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 TEX33O43247 280 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 KCNQ3O43525 872 aa5.15□□□□□ -1.59
PLS3-209ENST00000539310 GTPBP6O43824 516 aaPredicted RBP5.15□□□□□ -1.59
PLS3-209ENST00000539310 DDX58O95786 925 aaKnown RBP5.15□□□□□ -1.59
PLS3-209ENST00000539310 ATP5JP18859 108 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms