RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 BICD2Q8TD16 824 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 DACT1Q9NYF0 836 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 BAZ2AQ9UIF9 1905 aaKnown RBP20.37■□□□□ 0.85
SNX17-210ENST00000537606 MYH13Q9UKX3 1938 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 USP17L12C9JPN9 530 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 USP17L21D6R901 530 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 GRIK5Q16478 980 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 CRY2Q49AN0 593 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 CCDC82Q8N4S0 544 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 POLRMTO00411 1230 aaKnown RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 WTAPQ15007 396 aa20.36■□□□□ 0.85
SNX17-210ENST00000537606 ZNF827Q17R98 1081 aa20.36■□□□□ 0.85
SNX17-210ENST00000537606 FUCA2Q9BTY2 467 aa20.36■□□□□ 0.85
SNX17-210ENST00000537606 RNF41Q9H4P4 317 aaPredicted RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 LETM1O95202 739 aaPredicted RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 CTR9Q6PD62 1173 aa20.36■□□□□ 0.85
SNX17-210ENST00000537606 DZIP1Q86YF9 867 aaKnown RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 CMTR1Q8N1G2 835 aaKnown RBP20.36■□□□□ 0.85
SNX17-210ENST00000537606 ALG1Q9BT22 464 aa20.36■□□□□ 0.85
SNX17-210ENST00000537606 RANBP6O60518 1105 aaKnown RBP20.35■□□□□ 0.85
SNX17-210ENST00000537606 NR1I2O75469 434 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 UFL1O94874 794 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 APBA3O96018 575 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 NTRK3Q16288 839 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
SNX17-210ENST00000537606 ERICH2A1L162 156 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 SART3Q15020 963 aaKnown RBP20.35■□□□□ 0.85
SNX17-210ENST00000537606 MPNDQ8N594 471 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 USP25Q9UHP3 1055 aa20.35■□□□□ 0.85
SNX17-210ENST00000537606 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 ZSCAN30Q86W11 494 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 ANAPC4Q9UJX5 808 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 PDS5AQ29RF7 1337 aaKnown RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 CYP2D6P10635 497 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 DIXDC1Q155Q3 683 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 CPLX2Q6PUV4 134 aaKnown RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 ZNF396Q96N95 335 aaPredicted RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 DCP1AQ9NPI6 582 aaPredicted RBP20.34■□□□□ 0.85
SNX17-210ENST00000537606 RCOR1Q9UKL0 485 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
SNX17-210ENST00000537606 ESR2Q92731 530 aa20.33■□□□□ 0.85
SNX17-210ENST00000537606 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.85
SNX17-210ENST00000537606 CDKL5O76039 1030 aa20.33■□□□□ 0.84
SNX17-210ENST00000537606 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.84
SNX17-210ENST00000537606 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.84
SNX17-210ENST00000537606 CRNKL1Q9BZJ0 848 aaKnown RBP20.33■□□□□ 0.84
SNX17-210ENST00000537606 TNKSO95271 1327 aa20.32■□□□□ 0.84
SNX17-210ENST00000537606 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
SNX17-210ENST00000537606 CLIC4Q9Y696 253 aa20.32■□□□□ 0.84
SNX17-210ENST00000537606 GUCY1A2P33402 732 aa20.32■□□□□ 0.84
SNX17-210ENST00000537606 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
SNX17-210ENST00000537606 KIF23Q02241 960 aaPredicted RBP20.31■□□□□ 0.84
SNX17-210ENST00000537606 KRT40Q6A162 431 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 GGA1Q9UJY5 639 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 MYH2Q9UKX2 1941 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.31■□□□□ 0.84
SNX17-210ENST00000537606 ME1P48163 572 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 RTN1Q16799 776 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 SPTY2D1Q68D10 685 aaPredicted RBP20.31■□□□□ 0.84
SNX17-210ENST00000537606 ZNF654Q8IZM8 581 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 TNMDQ9H2S6 317 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 CD209Q9NNX6 404 aa20.31■□□□□ 0.84
SNX17-210ENST00000537606 SSRP1Q08945 709 aaKnown RBP20.3■□□□□ 0.84
SNX17-210ENST00000537606 CCAR1Q8IX12 1150 aaKnown RBP20.3■□□□□ 0.84
SNX17-210ENST00000537606 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
SNX17-210ENST00000537606 C6orf229H3BNL8 230 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 USP17L8P0C7I0 530 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 SEC23AQ15436 765 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 FAM47AQ5JRC9 791 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 OLFM4Q6UX06 510 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 ZSCAN10Q96SZ4 725 aaPredicted RBP20.29■□□□□ 0.84
SNX17-210ENST00000537606 GOLPH3LQ9H4A5 285 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 MCM9Q9NXL9 1143 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 NMT2O60551 498 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 BBOX1O75936 387 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 MYSM1Q5VVJ2 828 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
SNX17-210ENST00000537606 SH3RF3Q8TEJ3 882 aaPredicted RBP20.29■□□□□ 0.84
SNX17-210ENST00000537606 MYH15Q9Y2K3 1946 aa20.29■□□□□ 0.84
SNX17-210ENST00000537606 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 MSNP26038 577 aaKnown RBP20.28■□□□□ 0.84
SNX17-210ENST00000537606 FANCBQ8NB91 859 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 TBC1D16Q8TBP0 767 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms