RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TBC1D9Q6ZT07 1266 aa19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 FPGT-TNNI3KV9GXZ4 949 aa19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 MCAMP43121 646 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 RFX7Q2KHR2 1363 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 CCDC158Q5M9N0 1113 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 TTC39AQ5SRH9 613 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 NSUN4Q96CB9 384 aaKnown RBP19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 LRP2BPQ9P2M1 347 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 PTPN22Q9Y2R2 807 aa19.89■□□□□ 0.77
CLSTN3-204ENST00000535313 TLR2O60603 784 aa19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 MAP4K4O95819 1239 aaPredicted RBP19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 SH3BP5LQ7L8J4 393 aa19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 PICK1Q9NRD5 415 aa19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 KCNH4Q9UQ05 1017 aa19.88■□□□□ 0.77
CLSTN3-204ENST00000535313 ATRNL1Q5VV63 1379 aa19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 DDTLA6NHG4 134 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 PHF20L1A8MW92 1017 aa19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 RHBDL3P58872 404 aa19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 ZNF384Q8TF68 577 aa19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 NOL10Q9BSC4 688 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-204ENST00000535313 NPM3O75607 178 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 KIF22Q14807 665 aa19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 ANKRD23Q86SG2 305 aa19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 SCYL3Q8IZE3 742 aa19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 DOCK2Q92608 1830 aa19.86■□□□□ 0.77
CLSTN3-204ENST00000535313 PDE4DIPQ5VU43 2346 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 PDHXO00330 501 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 CXCL11O14625 94 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 MS4A1P11836 297 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 MAP3K10Q02779 954 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 PANK1Q8TE04 598 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 ZHX2Q9Y6X8 837 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 HTTP42858 3142 aa19.85■□□□□ 0.77
CLSTN3-204ENST00000535313 TNRC18O15417 2968 aaPredicted RBP19.84■□□□□ 0.77
CLSTN3-204ENST00000535313 CTNND1O60716 968 aaKnown RBP19.84■□□□□ 0.77
CLSTN3-204ENST00000535313 CAP1Q01518 475 aa19.84■□□□□ 0.77
CLSTN3-204ENST00000535313 NAA16Q6N069 864 aaPredicted RBP19.84■□□□□ 0.77
CLSTN3-204ENST00000535313 CEP85Q6P2H3 762 aa19.84■□□□□ 0.77
CLSTN3-204ENST00000535313 BAG3O95817 575 aa19.83■□□□□ 0.77
CLSTN3-204ENST00000535313 PTPRAP18433 802 aa19.83■□□□□ 0.77
CLSTN3-204ENST00000535313 TEX11Q8IYF3 940 aa19.83■□□□□ 0.77
CLSTN3-204ENST00000535313 ZNF512BQ96KM6 892 aaPredicted RBP19.83■□□□□ 0.77
CLSTN3-204ENST00000535313 TBC1D12O60347 775 aa19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 PLCG2P16885 1265 aa19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 LACTBP83111 547 aaPredicted RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 FASTKD5Q7L8L6 764 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 ERC1Q8IUD2 1116 aa19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 ARMC5Q96C12 935 aa19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 PARK7Q99497 189 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 CCDC8Q9H0W5 538 aaPredicted RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 OSBPL5Q9H0X9 879 aaPredicted RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 DBNLQ9UJU6 430 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-204ENST00000535313 IGSF3O75054 1194 aa19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 CYP2E1P05181 493 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 MOGSQ13724 837 aa19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 C17orf99Q6UX52 265 aa19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 CPA4Q9UI42 421 aa19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 AFG3L2Q9Y4W6 797 aa19.81■□□□□ 0.76
CLSTN3-204ENST00000535313 A0A0G2JLL6 359 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 GNRH1P01148 92 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 SLURP2P0DP57 97 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 ZAP70P43403 619 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 SLC9C1Q4G0N8 1177 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 PRRT2Q7Z6L0 340 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 NBPF11Q86T75 865 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 SH3RF3Q8TEJ3 882 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 EAF2Q96CJ1 260 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 ARHGAP39Q9C0H5 1083 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 AATFQ9NY61 560 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 EXOC6BQ9Y2D4 811 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 PTCH2Q9Y6C5 1203 aa19.8■□□□□ 0.76
CLSTN3-204ENST00000535313 COL2A1P02458 1487 aaPredicted RBP19.79■□□□□ 0.76
CLSTN3-204ENST00000535313 HSP90AB4PQ58FF6 505 aa19.79■□□□□ 0.76
CLSTN3-204ENST00000535313 GADL1Q6ZQY3 521 aa19.79■□□□□ 0.76
CLSTN3-204ENST00000535313 TLR7Q9NYK1 1049 aaKnown RBP19.79■□□□□ 0.76
CLSTN3-204ENST00000535313 CENPFP49454 3210 aa19.79■□□□□ 0.76
CLSTN3-204ENST00000535313 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 PRMT2P55345 433 aa19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 PPP4CP60510 307 aa19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 GPAT2Q6NUI2 795 aa19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 PIH1D3Q9NQM4 214 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 KIAA0100Q14667 2235 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-204ENST00000535313 ADGRA2Q96PE1 1338 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 TRIM75PA6NK02 468 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 ECM2O94769 699 aaPredicted RBP19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 PSMC4P43686 418 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 AACSQ86V21 672 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 TMEM106CQ9BVX2 250 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 DHX36Q9H2U1 1008 aaKnown RBP19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 HERC5Q9UII4 1024 aaKnown RBP19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 DDX19BQ9UMR2 479 aa19.77■□□□□ 0.76
CLSTN3-204ENST00000535313 DOCK1Q14185 1865 aa19.76■□□□□ 0.75
CLSTN3-204ENST00000535313 MAST2Q6P0Q8 1798 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms