RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ZFPM1Q8IX07 1006 aa26.79■■□□□ 1.88
LRRK1-208ENST00000532029 HOOK2Q96ED9 719 aa26.79■■□□□ 1.88
LRRK1-208ENST00000532029 TEPSINQ96N21 525 aa26.79■■□□□ 1.88
LRRK1-208ENST00000532029 OSBPL5Q9H0X9 879 aaPredicted RBP26.79■■□□□ 1.88
LRRK1-208ENST00000532029 FLT1P17948 1338 aa26.79■■□□□ 1.88
LRRK1-208ENST00000532029 TMEM88BA6NKF7 163 aa26.78■■□□□ 1.88
LRRK1-208ENST00000532029 M0R2C6 588 aa26.78■■□□□ 1.88
LRRK1-208ENST00000532029 HELLSQ9NRZ9 838 aa26.78■■□□□ 1.88
LRRK1-208ENST00000532029 AK9Q5TCS8 1911 aa26.78■■□□□ 1.88
LRRK1-208ENST00000532029 GPAA1O43292 621 aa26.77■■□□□ 1.88
LRRK1-208ENST00000532029 TTLL12Q14166 644 aaPredicted RBP26.77■■□□□ 1.88
LRRK1-208ENST00000532029 CST9Q5W186 159 aa26.77■■□□□ 1.88
LRRK1-208ENST00000532029 C2orf69Q8N8R5 385 aa26.77■■□□□ 1.88
LRRK1-208ENST00000532029 GBA2Q9HCG7 927 aaPredicted RBP26.77■■□□□ 1.88
LRRK1-208ENST00000532029 TRPM7Q96QT4 1865 aa26.76■■□□□ 1.88
LRRK1-208ENST00000532029 NMIQ13287 307 aaPredicted RBP26.76■■□□□ 1.87
LRRK1-208ENST00000532029 BMP2KLQ5H9B9 411 aa26.76■■□□□ 1.87
LRRK1-208ENST00000532029 CDAN1Q8IWY9 1227 aa26.76■■□□□ 1.87
LRRK1-208ENST00000532029 STRBPQ96SI9 672 aaKnown RBP26.76■■□□□ 1.87
LRRK1-208ENST00000532029 SEC62Q99442 399 aaKnown RBP26.76■■□□□ 1.87
LRRK1-208ENST00000532029 SLC4A4Q9Y6R1 1079 aa26.76■■□□□ 1.87
LRRK1-208ENST00000532029 PPP1R12BO60237 982 aaPredicted RBP26.75■■□□□ 1.87
LRRK1-208ENST00000532029 GNAT2P19087 354 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 PRKG1Q13976 671 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 SDR42E1Q8WUS8 393 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 DDRGK1Q96HY6 314 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 FAM227BQ96M60 508 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 CSRNP1Q96S65 589 aa26.75■■□□□ 1.87
LRRK1-208ENST00000532029 COL2A1P02458 1487 aaPredicted RBP26.74■■□□□ 1.87
LRRK1-208ENST00000532029 ATRNL1Q5VV63 1379 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 A0A0D9SFI3 127 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 PRKAB2O43741 272 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 FKBP1BP68106 108 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 HTRA3P83110 453 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 MCMDC2Q4G0Z9 681 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 SH3BP5LQ7L8J4 393 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 DHX36Q9H2U1 1008 aaKnown RBP26.74■■□□□ 1.87
LRRK1-208ENST00000532029 ATP8A2Q9NTI2 1148 aa26.74■■□□□ 1.87
LRRK1-208ENST00000532029 SAP30BPQ9UHR5 308 aaKnown RBP26.74■■□□□ 1.87
LRRK1-208ENST00000532029 SSC5DA1L4H1 1573 aa26.73■■□□□ 1.87
LRRK1-208ENST00000532029 DDTLA6NHG4 134 aaPredicted RBP26.73■■□□□ 1.87
LRRK1-208ENST00000532029 DCAF15Q66K64 600 aa26.73■■□□□ 1.87
LRRK1-208ENST00000532029 ARMC9Q7Z3E5 817 aa26.73■■□□□ 1.87
LRRK1-208ENST00000532029 CREBZFQ9NS37 354 aa26.73■■□□□ 1.87
LRRK1-208ENST00000532029 ABT1Q9ULW3 272 aaKnown RBP26.73■■□□□ 1.87
LRRK1-208ENST00000532029 FOCADQ5VW36 1801 aa26.73■■□□□ 1.87
LRRK1-208ENST00000532029 CDK5RAP2Q96SN8 1893 aa26.72■■□□□ 1.87
LRRK1-208ENST00000532029 CWC27Q6UX04 472 aaKnown RBP26.72■■□□□ 1.87
LRRK1-208ENST00000532029 DCP1AQ9NPI6 582 aaPredicted RBP26.72■■□□□ 1.87
LRRK1-208ENST00000532029 ANGEL1Q9UNK9 670 aaKnown RBP26.72■■□□□ 1.87
LRRK1-208ENST00000532029 GTF3C3Q9Y5Q9 886 aa26.72■■□□□ 1.87
LRRK1-208ENST00000532029 HLA-DOAP06340 250 aa26.71■■□□□ 1.87
LRRK1-208ENST00000532029 MFAP1P55081 439 aaKnown RBP26.71■■□□□ 1.87
LRRK1-208ENST00000532029 CCDC129Q6ZRS4 1044 aa26.71■■□□□ 1.87
LRRK1-208ENST00000532029 MCM9Q9NXL9 1143 aa26.71■■□□□ 1.87
LRRK1-208ENST00000532029 PALD1Q9ULE6 856 aa26.71■■□□□ 1.87
LRRK1-208ENST00000532029 PAPPA2Q9BXP8 1791 aa26.71■■□□□ 1.87
LRRK1-208ENST00000532029 APPP05067 770 aa26.7■■□□□ 1.86
LRRK1-208ENST00000532029 TTC6Q86TZ1 520 aa26.7■■□□□ 1.86
LRRK1-208ENST00000532029 PI4KBQ9UBF8 816 aa26.7■■□□□ 1.86
LRRK1-208ENST00000532029 MKRN1Q9UHC7 482 aaKnown RBP26.7■■□□□ 1.86
LRRK1-208ENST00000532029 POLR3DP05423 398 aaPredicted RBP26.69■■□□□ 1.86
LRRK1-208ENST00000532029 CHMLP26374 656 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 IREB2P48200 963 aaKnown RBP26.69■■□□□ 1.86
LRRK1-208ENST00000532029 MOB2Q70IA6 237 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 MIGA2Q7L4E1 593 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 AMOTL1Q8IY63 956 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 RUFY2Q8WXA3 655 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 ZNF341Q9BYN7 854 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 NACAP1Q9BZK3 213 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 FZD1Q9UP38 647 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 TLL2Q9Y6L7 1015 aa26.69■■□□□ 1.86
LRRK1-208ENST00000532029 CCDC171Q6TFL3 1326 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 NAV1Q8NEY1 1877 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 PATL2C9JE40 543 aaKnown RBP26.68■■□□□ 1.86
LRRK1-208ENST00000532029 HUNKP57058 714 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 SLC4A8Q2Y0W8 1093 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 GIMAP6Q6P9H5 292 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 TRIM34Q9BYJ4 488 aa26.68■■□□□ 1.86
LRRK1-208ENST00000532029 GSG1L2A8MUP6 293 aa26.67■■□□□ 1.86
LRRK1-208ENST00000532029 UBE2Q2LH0YL09 131 aa26.67■■□□□ 1.86
LRRK1-208ENST00000532029 USP2O75604 605 aaPredicted RBP26.67■■□□□ 1.86
LRRK1-208ENST00000532029 SAPCD2Q86UD0 394 aa26.67■■□□□ 1.86
LRRK1-208ENST00000532029 CRACR2BQ8N4Y2 399 aaPredicted RBP26.67■■□□□ 1.86
LRRK1-208ENST00000532029 DNAJC5GQ8N7S2 189 aa26.67■■□□□ 1.86
LRRK1-208ENST00000532029 TDO2P48775 406 aa26.66■■□□□ 1.86
LRRK1-208ENST00000532029 MAP3K11Q16584 847 aa26.66■■□□□ 1.86
LRRK1-208ENST00000532029 ZNF589Q86UQ0 364 aaPredicted RBP26.66■■□□□ 1.86
LRRK1-208ENST00000532029 FOXP4Q8IVH2 680 aaPredicted RBP26.66■■□□□ 1.86
LRRK1-208ENST00000532029 RAD50Q92878 1312 aa26.65■■□□□ 1.86
LRRK1-208ENST00000532029 MYH1P12882 1939 aa26.65■■□□□ 1.86
LRRK1-208ENST00000532029 TBC1D12O60347 775 aa26.65■■□□□ 1.86
LRRK1-208ENST00000532029 IFNL3Q8IZI9 196 aa26.65■■□□□ 1.86
LRRK1-208ENST00000532029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.65■■□□□ 1.86
LRRK1-208ENST00000532029 HERC5Q9UII4 1024 aaKnown RBP26.65■■□□□ 1.86
LRRK1-208ENST00000532029 USP17L12C9JPN9 530 aa26.64■■□□□ 1.86
LRRK1-208ENST00000532029 USP17L21D6R901 530 aa26.64■■□□□ 1.86
LRRK1-208ENST00000532029 WRNIP1Q96S55 665 aa26.64■■□□□ 1.86
LRRK1-208ENST00000532029 EPB41L4AQ9HCS5 686 aaPredicted RBP26.64■■□□□ 1.86
LRRK1-208ENST00000532029 ARPP21Q9UBL0 812 aaPredicted RBP26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms