RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
ATM-217ENST00000531957 ASB16Q96NS5 453 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 OSBPL7Q9BZF2 842 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 SYNGAP1Q96PV0 1343 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 XRCC5P13010 732 aaKnown RBP6.26□□□□□ -1.41
ATM-217ENST00000531957 ID3Q02535 119 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 MAP1SQ66K74 1059 aaPredicted RBP6.26□□□□□ -1.41
ATM-217ENST00000531957 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 MPRIPQ6WCQ1 1025 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 C1GALT1Q9NS00 363 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 PCDHGC5Q9Y5F6 944 aa6.26□□□□□ -1.41
ATM-217ENST00000531957 PAGE1O75459 146 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 P4HBP07237 508 aaKnown RBP6.25□□□□□ -1.41
ATM-217ENST00000531957 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
ATM-217ENST00000531957 CDK5R2Q13319 367 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 PKN1Q16512 942 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 ZNF792Q3KQV3 632 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 OGFOD3Q6PK18 319 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 CBX8Q9HC52 389 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 DISC1Q9NRI5 854 aa6.25□□□□□ -1.41
ATM-217ENST00000531957 ENC1O14682 589 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 RNGTTO60942 597 aaKnown RBP6.24□□□□□ -1.41
ATM-217ENST00000531957 SLFN14P0C7P3 912 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 ARNTP27540 789 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 GSTT1P30711 240 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 TTLL4Q14679 1199 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 ATG4DQ86TL0 474 aaPredicted RBP6.24□□□□□ -1.41
ATM-217ENST00000531957 GRIN3AQ8TCU5 1115 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 GPBAR1Q8TDU6 330 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 FBF1Q8TES7 1133 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 ATXN3LQ9H3M9 355 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 KRT82Q9NSB4 513 aa6.24□□□□□ -1.41
ATM-217ENST00000531957 FARP2O94887 1054 aaPredicted RBP6.23□□□□□ -1.41
ATM-217ENST00000531957 NME2P22392 152 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 RASIP1Q5U651 963 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 ALG1LQ6GMV1 187 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 ZNF574Q6ZN55 896 aaPredicted RBP6.23□□□□□ -1.41
ATM-217ENST00000531957 SMYD4Q8IYR2 804 aaPredicted RBP6.23□□□□□ -1.41
ATM-217ENST00000531957 NETO1Q8TDF5 533 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 ACSBG1Q96GR2 724 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 NECAB3Q96P71 396 aaPredicted RBP6.23□□□□□ -1.41
ATM-217ENST00000531957 RC3H2Q9HBD1 1191 aaKnown RBP6.23□□□□□ -1.41
ATM-217ENST00000531957 CSADQ9Y600 493 aa6.23□□□□□ -1.41
ATM-217ENST00000531957 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 LDHBP07195 334 aaKnown RBP6.22□□□□□ -1.41
ATM-217ENST00000531957 NEFMP07197 916 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 FUT4P22083 530 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 ATP2B2Q01814 1243 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 ZNF648Q5T619 568 aaPredicted RBP6.22□□□□□ -1.41
ATM-217ENST00000531957 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 AEBP1Q8IUX7 1158 aa6.22□□□□□ -1.41
ATM-217ENST00000531957 CELA3AP09093 270 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 USP17L7P0C7H9 530 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 FAM87AP0C7U9 286 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 BMP6P22004 513 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 ZNF252P-AS1Q0IIN9 211 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 ZC3H12AQ5D1E8 599 aaKnown RBP6.21□□□□□ -1.42
ATM-217ENST00000531957 FAM168AQ92567 244 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 ISL2Q96A47 359 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 SRCIN1Q9C0H9 1055 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 RNF19AQ9NV58 838 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 SPG7Q9UQ90 795 aa6.21□□□□□ -1.42
ATM-217ENST00000531957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
ATM-217ENST00000531957 LEFTY1O75610 366 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 ARHGAP27Q6ZUM4 889 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 KSR1Q8IVT5 923 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 FAM181AQ8N9Y4 354 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 SLC38A3Q99624 504 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 MKNK2Q9HBH9 465 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 VAV3Q9UKW4 847 aa6.2□□□□□ -1.42
ATM-217ENST00000531957 DCDC2CA8MYV0 355 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 PRKCQQ04759 706 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 IFI16Q16666 785 aaKnown RBP6.19□□□□□ -1.42
ATM-217ENST00000531957 PPM1JQ5JR12 505 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 SPRED2Q7Z698 418 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 UBE3DQ7Z6J8 389 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 PLD6Q8N2A8 252 aaKnown RBP6.19□□□□□ -1.42
ATM-217ENST00000531957 TMEM40Q8WWA1 233 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 CEP44Q9C0F1 390 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
ATM-217ENST00000531957 PPM1HQ9ULR3 514 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 U3KQE9 123 aa6.19□□□□□ -1.42
ATM-217ENST00000531957 CARMIL2Q6F5E8 1435 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 ERVK-24P63145 666 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 ANGEL2Q5VTE6 544 aaKnown RBP6.18□□□□□ -1.42
ATM-217ENST00000531957 PCNX4Q63HM2 1172 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 LLGL2Q6P1M3 1020 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 C12orf40Q86WS4 652 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATM-217ENST00000531957 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
ATM-217ENST00000531957 CACNA2D2Q9NY47 1150 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms