RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 PDE6AP16499 860 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 PICALMQ13492 652 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 SLC9C2Q5TAH2 1124 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 TSHZ3Q63HK5 1081 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 DCAF15Q66K64 600 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 ANKRD13AQ8IZ07 590 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 CLMNQ96JQ2 1002 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
CCDC90B-216ENST00000529856 DDTLA6NHG4 134 aaPredicted RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 HSPA1AP0DMV8 641 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 HSPA1BP0DMV9 641 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 MIGA2Q7L4E1 593 aa15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
CCDC90B-216ENST00000529856 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 MX1P20591 662 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 MIGA1Q8NAN2 632 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 PI4K2BQ8TCG2 481 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 TGFBRAP1Q8WUH2 860 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 ZNF341Q9BYN7 854 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 OSBPL5Q9H0X9 879 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
CCDC90B-216ENST00000529856 ERC2O15083 957 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 ADD2P35612 726 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 MAP3K10Q02779 954 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 SPRYD7Q5W111 196 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
CCDC90B-216ENST00000529856 CDK5RAP2Q96SN8 1893 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 MAGEB6P1A0A0J9YX57 407 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 NUCB1Q02818 461 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 VGLL4Q14135 290 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 UBE3CQ15386 1083 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 MAPKAPK5Q8IW41 473 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 WNK4Q96J92 1243 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 WRNIP1Q96S55 665 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 RIOK1Q9BRS2 568 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 CSADQ9Y600 493 aa15.34■□□□□ 0.05
CCDC90B-216ENST00000529856 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.05
CCDC90B-216ENST00000529856 OTOFQ9HC10 1997 aa15.33■□□□□ 0.05
CCDC90B-216ENST00000529856 TBC1D12O60347 775 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 ZBTB48P10074 688 aaPredicted RBP15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 PDE1AP54750 535 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 MKRN3Q13064 507 aaKnown RBP15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 SLFNL1Q499Z3 407 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 ZKSCAN4Q969J2 545 aaPredicted RBP15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 ELP3Q9H9T3 547 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 FLT1P17948 1338 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 FOCADQ5VW36 1801 aa15.33■□□□□ 0.04
CCDC90B-216ENST00000529856 PHF20L1A8MW92 1017 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 FOXN1O15353 648 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 CHGBP05060 677 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 INPP5BP32019 993 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 GJA5P36382 358 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 TM4SF4P48230 202 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 DHX36Q9H2U1 1008 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 MYH7P12883 1935 aa15.32■□□□□ 0.04
CCDC90B-216ENST00000529856 CA12O43570 354 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 SLURP2P0DP57 97 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 USP5P45974 858 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 OPTNQ96CV9 577 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 PI4KBQ9UBF8 816 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 PALD1Q9ULE6 856 aa15.31■□□□□ 0.04
CCDC90B-216ENST00000529856 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 ZFYP08048 801 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 NOL9Q5SY16 702 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 ERO1BQ86YB8 467 aa15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 FOXP4Q8IVH2 680 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 LCORLQ8N3X6 602 aa15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 CRNKL1Q9BZJ0 848 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms