RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 ZNF112Q9UJU3 913 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 PLCG2P16885 1265 aa14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 GJA5P36382 358 aa14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 NOM1Q5C9Z4 860 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 PIH1D3Q9NQM4 214 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-209ENST00000528230 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 APBB1O00213 710 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 TTF1Q15361 905 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 OTUD7BQ6GQQ9 843 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 IFNL1Q8IU54 200 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 DCTPP1Q9H773 170 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 DDX4Q9NQI0 724 aaKnown RBP14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 SNCAIPQ9Y6H5 919 aa14.77□□□□□ -0.05
TRAPPC4-209ENST00000528230 COL2A1P02458 1487 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 ATRNL1Q5VV63 1379 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 TBC1D12O60347 775 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 GTF2A2P52657 109 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 MAP3K12Q12852 859 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 SH3BP5LQ7L8J4 393 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 CERS3Q8IU89 383 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 ZSCAN29Q8IWY8 852 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 ZKSCAN4Q969J2 545 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 MS4A4AQ96JQ5 239 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 FOCADQ5VW36 1801 aa14.76□□□□□ -0.05
TRAPPC4-209ENST00000528230 DDTLA6NHG4 134 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 INPP5BP32019 993 aa14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 PPATQ06203 517 aa14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 PICALMQ13492 652 aa14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 NOL9Q5SY16 702 aaKnown RBP14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 TEX11Q8IYF3 940 aa14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 AATFQ9NY61 560 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAPPC4-209ENST00000528230 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 ATP5JP18859 108 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 CYP7A1P22680 504 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 PPIL2Q13356 520 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 ADGRA1Q86SQ6 560 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 SH3RF3Q8TEJ3 882 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 OSBPL5Q9H0X9 879 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 DHX36Q9H2U1 1008 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 ANTXR1Q9H6X2 564 aa14.74□□□□□ -0.05
TRAPPC4-209ENST00000528230 GPR25O00155 361 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 IGF2BP3O00425 579 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 AAMPQ13685 434 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 MAGEB6Q8N7X4 407 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 PTPN18Q99952 460 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
TRAPPC4-209ENST00000528230 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 IRF6O14896 467 aa14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 CTNND1O60716 968 aaKnown RBP14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 CETPP11597 493 aa14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 SNAPC2Q13487 334 aa14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 CCL15Q16663 113 aa14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 ZCCHC17Q9NP64 241 aaKnown RBP14.72□□□□□ -0.05
TRAPPC4-209ENST00000528230 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 FOXP4Q8IVH2 680 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 SCYL3Q8IZE3 742 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 ZNF296Q8WUU4 475 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 BRI3BPQ8WY22 251 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 CRBNQ96SW2 442 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 HAUS7Q99871 368 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 PI4KBQ9UBF8 816 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 KCNH4Q9UQ05 1017 aa14.71□□□□□ -0.05
TRAPPC4-209ENST00000528230 MYH1P12882 1939 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 DOCK1Q14185 1865 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 GOLIM4O00461 696 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 CXCL11O14625 94 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 FKTNO75072 461 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 DYNLL1P63167 89 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 DGKZQ13574 1117 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 ABHD8Q96I13 439 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 BOLA2Q9H3K6 86 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 R3HDMLQ9H3Y0 253 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 PAG1Q9NWQ8 432 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 MYH7P12883 1935 aa14.7□□□□□ -0.06
TRAPPC4-209ENST00000528230 FLT1P17948 1338 aa14.69□□□□□ -0.06
TRAPPC4-209ENST00000528230 PDE6AP16499 860 aa14.69□□□□□ -0.06
TRAPPC4-209ENST00000528230 PTPRAP18433 802 aa14.69□□□□□ -0.06
TRAPPC4-209ENST00000528230 CRHR2Q13324 411 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms