RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 DDX4Q9NQI0 724 aaKnown RBP27.44■■□□□ 1.98
LMNB2-204ENST00000527409 GJA5P36382 358 aa27.43■■□□□ 1.98
LMNB2-204ENST00000527409 TMED8Q6PL24 325 aaPredicted RBP27.43■■□□□ 1.98
LMNB2-204ENST00000527409 ZSCAN29Q8IWY8 852 aaPredicted RBP27.43■■□□□ 1.98
LMNB2-204ENST00000527409 ATRNL1Q5VV63 1379 aa27.43■■□□□ 1.98
LMNB2-204ENST00000527409 COL2A1P02458 1487 aaPredicted RBP27.43■■□□□ 1.98
LMNB2-204ENST00000527409 FOCADQ5VW36 1801 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 SPDYE5A6NIY4 337 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 IDH1O75874 414 aaKnown RBP27.42■■□□□ 1.98
LMNB2-204ENST00000527409 ALDH1A1P00352 501 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 PLCG2P16885 1265 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 ZNF112Q9UJU3 913 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 SNCAIPQ9Y6H5 919 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 CDK5RAP2Q96SN8 1893 aa27.42■■□□□ 1.98
LMNB2-204ENST00000527409 PPP4CP60510 307 aa27.41■■□□□ 1.98
LMNB2-204ENST00000527409 MAP3K12Q12852 859 aa27.41■■□□□ 1.98
LMNB2-204ENST00000527409 TTF1Q15361 905 aaPredicted RBP27.41■■□□□ 1.98
LMNB2-204ENST00000527409 TEX11Q8IYF3 940 aa27.41■■□□□ 1.98
LMNB2-204ENST00000527409 ZKSCAN4Q969J2 545 aaPredicted RBP27.41■■□□□ 1.98
LMNB2-204ENST00000527409 AATFQ9NY61 560 aaKnown RBP eCLIP27.41■■□□□ 1.98
LMNB2-204ENST00000527409 SH3BP5LQ7L8J4 393 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 ERO1BQ86YB8 467 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 IFNL1Q8IU54 200 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 CFHR5Q9BXR6 569 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 DCTPP1Q9H773 170 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 NDUFB9Q9Y6M9 179 aa27.4■■□□□ 1.98
LMNB2-204ENST00000527409 DDTLA6NHG4 134 aaPredicted RBP27.39■■□□□ 1.98
LMNB2-204ENST00000527409 ADGRA1Q86SQ6 560 aa27.39■■□□□ 1.98
LMNB2-204ENST00000527409 SH3RF3Q8TEJ3 882 aaPredicted RBP27.39■■□□□ 1.98
LMNB2-204ENST00000527409 CNKSR2Q8WXI2 1034 aa27.39■■□□□ 1.98
LMNB2-204ENST00000527409 OTUD5Q96G74 571 aa27.39■■□□□ 1.98
LMNB2-204ENST00000527409 ANTXR1Q9H6X2 564 aa27.39■■□□□ 1.98
LMNB2-204ENST00000527409 TESPA1A2RU30 521 aaPredicted RBP27.38■■□□□ 1.97
LMNB2-204ENST00000527409 CYP7A1P22680 504 aa27.38■■□□□ 1.97
LMNB2-204ENST00000527409 GTF2A2P52657 109 aa27.38■■□□□ 1.97
LMNB2-204ENST00000527409 MAP3K10Q02779 954 aa27.38■■□□□ 1.97
LMNB2-204ENST00000527409 OTUD7BQ6GQQ9 843 aa27.38■■□□□ 1.97
LMNB2-204ENST00000527409 CERS3Q8IU89 383 aa27.38■■□□□ 1.97
LMNB2-204ENST00000527409 OSBPL5Q9H0X9 879 aaPredicted RBP27.38■■□□□ 1.97
LMNB2-204ENST00000527409 INPP5BP32019 993 aa27.37■■□□□ 1.97
LMNB2-204ENST00000527409 NOL9Q5SY16 702 aaKnown RBP27.37■■□□□ 1.97
LMNB2-204ENST00000527409 MAGEB6Q8N7X4 407 aa27.37■■□□□ 1.97
LMNB2-204ENST00000527409 MS4A4AQ96JQ5 239 aa27.37■■□□□ 1.97
LMNB2-204ENST00000527409 CRBNQ96SW2 442 aa27.37■■□□□ 1.97
LMNB2-204ENST00000527409 PCDHB15Q9Y5E8 787 aa27.37■■□□□ 1.97
LMNB2-204ENST00000527409 IGF2BP3O00425 579 aaKnown RBP eCLIP27.36■■□□□ 1.97
LMNB2-204ENST00000527409 TBC1D8O95759 1140 aa27.36■■□□□ 1.97
LMNB2-204ENST00000527409 ATP5JP18859 108 aa27.36■■□□□ 1.97
LMNB2-204ENST00000527409 PPIL2Q13356 520 aa27.36■■□□□ 1.97
LMNB2-204ENST00000527409 NOM1Q5C9Z4 860 aaKnown RBP27.36■■□□□ 1.97
LMNB2-204ENST00000527409 DNAJC2Q99543 621 aaKnown RBP27.36■■□□□ 1.97
LMNB2-204ENST00000527409 PPATQ06203 517 aa27.35■■□□□ 1.97
LMNB2-204ENST00000527409 DOCK1Q14185 1865 aa27.34■■□□□ 1.97
LMNB2-204ENST00000527409 SMARCA5O60264 1052 aaPredicted RBP27.34■■□□□ 1.97
LMNB2-204ENST00000527409 TBC1D12O60347 775 aa27.34■■□□□ 1.97
LMNB2-204ENST00000527409 PHF20L1A8MW92 1017 aa27.33■■□□□ 1.97
LMNB2-204ENST00000527409 GOLIM4O00461 696 aa27.33■■□□□ 1.97
LMNB2-204ENST00000527409 DHX36Q9H2U1 1008 aaKnown RBP27.33■■□□□ 1.97
LMNB2-204ENST00000527409 CCL15-CCL14A0A0B4J2E2 113 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 IRF6O14896 467 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 CETPP11597 493 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 SNAPC2Q13487 334 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 AAMPQ13685 434 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 CCL15Q16663 113 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 TGFBRAP1Q8WUH2 860 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 BRI3BPQ8WY22 251 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 PTPN18Q99952 460 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 PAG1Q9NWQ8 432 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 FLT1P17948 1338 aa27.32■■□□□ 1.96
LMNB2-204ENST00000527409 GPR25O00155 361 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 DYNLL1P63167 89 aaKnown RBP27.31■■□□□ 1.96
LMNB2-204ENST00000527409 SCYL3Q8IZE3 742 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 MIGA1Q8NAN2 632 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 HAUS7Q99871 368 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 BOLA2Q9H3K6 86 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 MYH7P12883 1935 aa27.31■■□□□ 1.96
LMNB2-204ENST00000527409 SIPA1L1O43166 1804 aa27.3■■□□□ 1.96
LMNB2-204ENST00000527409 SLC9C2Q5TAH2 1124 aa27.3■■□□□ 1.96
LMNB2-204ENST00000527409 MAPKAPK5Q8IW41 473 aa27.3■■□□□ 1.96
LMNB2-204ENST00000527409 PICK1Q9NRD5 415 aa27.3■■□□□ 1.96
LMNB2-204ENST00000527409 PI4KBQ9UBF8 816 aa27.3■■□□□ 1.96
LMNB2-204ENST00000527409 HERC5Q9UII4 1024 aaKnown RBP27.3■■□□□ 1.96
LMNB2-204ENST00000527409 MYH1P12882 1939 aa27.29■■□□□ 1.96
LMNB2-204ENST00000527409 CTNND1O60716 968 aaKnown RBP27.29■■□□□ 1.96
LMNB2-204ENST00000527409 PDE6AP16499 860 aa27.29■■□□□ 1.96
LMNB2-204ENST00000527409 ZNF296Q8WUU4 475 aaPredicted RBP27.29■■□□□ 1.96
LMNB2-204ENST00000527409 GPATCH3Q96I76 525 aa27.29■■□□□ 1.96
LMNB2-204ENST00000527409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.29■■□□□ 1.96
LMNB2-204ENST00000527409 ECHDC1Q9NTX5 307 aa27.29■■□□□ 1.96
LMNB2-204ENST00000527409 ATAD5Q96QE3 1844 aa27.28■■□□□ 1.96
LMNB2-204ENST00000527409 KCNH4Q9UQ05 1017 aa27.28■■□□□ 1.96
LMNB2-204ENST00000527409 DGKZQ13574 1117 aa27.27■■□□□ 1.96
LMNB2-204ENST00000527409 EDC3Q96F86 508 aaKnown RBP27.27■■□□□ 1.96
LMNB2-204ENST00000527409 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.27■■□□□ 1.966e-6■■□□□ 14.1
LMNB2-204ENST00000527409 R3HDMLQ9H3Y0 253 aa27.27■■□□□ 1.96
LMNB2-204ENST00000527409 ZCCHC17Q9NP64 241 aaKnown RBP27.27■■□□□ 1.96
LMNB2-204ENST00000527409 ZNF532Q9HCE3 1301 aa27.26■■□□□ 1.95
LMNB2-204ENST00000527409 PHIPQ8WWQ0 1821 aa27.26■■□□□ 1.95
LMNB2-204ENST00000527409 FKTNO75072 461 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms