RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MAP1SQ66K74 1059 aaPredicted RBP16.44■□□□□ 0.22
CD44-224ENST00000526669 APOBEC3FQ8IUX4 373 aaKnown RBP16.44■□□□□ 0.22
CD44-224ENST00000526669 DCPSQ96C86 337 aaKnown RBP16.44■□□□□ 0.22
CD44-224ENST00000526669 EPB41L4AQ9HCS5 686 aaPredicted RBP16.44■□□□□ 0.22
CD44-224ENST00000526669 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 FOXP2O15409 715 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
CD44-224ENST00000526669 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 CDAN1Q8IWY9 1227 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 IDI2Q9BXS1 227 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
CD44-224ENST00000526669 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
CD44-224ENST00000526669 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
CD44-224ENST00000526669 PTH1RQ03431 593 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 EVX2Q03828 476 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 RASA3Q14644 834 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 C8orf34Q49A92 452 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 PRAMEF18Q5VWM3 479 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
CD44-224ENST00000526669 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
CD44-224ENST00000526669 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 PITPNM2Q9BZ72 1349 aa16.42■□□□□ 0.22
CD44-224ENST00000526669 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
CD44-224ENST00000526669 CYP2D6P10635 497 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 GNAT2P19087 354 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 TDO2P48775 406 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 TNNI2P48788 182 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
CD44-224ENST00000526669 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
CD44-224ENST00000526669 MCM9Q9NXL9 1143 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
CD44-224ENST00000526669 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
CD44-224ENST00000526669 SMIM22K7EJ46 135 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 ENTPD3O75355 529 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 SLURP2P0DP57 97 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
CD44-224ENST00000526669 FKBP1CQ5VVH2 108 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 SH3BP5LQ7L8J4 393 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 STK11IPQ8N1F8 1099 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
CD44-224ENST00000526669 NAPBQ9H115 298 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 DEFB129Q9H1M3 183 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 ATP8A2Q9NTI2 1148 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 PALD1Q9ULE6 856 aa16.4■□□□□ 0.22
CD44-224ENST00000526669 MYH4Q9Y623 1939 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
CD44-224ENST00000526669 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 FAM83AQ86UY5 434 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 DDRGK1Q96HY6 314 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 MKRN1Q9UHC7 482 aaKnown RBP16.39■□□□□ 0.21
CD44-224ENST00000526669 DOCK1Q14185 1865 aa16.39■□□□□ 0.21
CD44-224ENST00000526669 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 USP17L21D6R901 530 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 TRAF5O00463 557 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 SEC24BO95487 1268 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
CD44-224ENST00000526669 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 DSCC1Q9BVC3 393 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 PAPPA2Q9BXP8 1791 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 SSC5DA1L4H1 1573 aa16.38■□□□□ 0.21
CD44-224ENST00000526669 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
CD44-224ENST00000526669 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
CD44-224ENST00000526669 FAM196BA6NMK8 535 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
CD44-224ENST00000526669 FGAP02671 866 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 HAND2P61296 217 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 CDC37L1Q7L3B6 337 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 TEPSINQ96N21 525 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 CSRNP1Q96S65 589 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
CD44-224ENST00000526669 RBM8AQ9Y5S9 174 aaKnown RBP16.37■□□□□ 0.21
CD44-224ENST00000526669 PLCD1P51178 756 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 PRKG1Q13976 671 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 ALX1Q15699 326 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
CD44-224ENST00000526669 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
CD44-224ENST00000526669 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
CD44-224ENST00000526669 REC8O95072 547 aa16.34■□□□□ 0.21
CD44-224ENST00000526669 PPARAQ07869 468 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms