RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TRPM7Q96QT4 1865 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 WDHD1O75717 1129 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 IGHDP01880 384 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 SLC10A3P09131 477 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 ADD2P35612 726 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 PDE1AP54750 535 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 RHBDL3P58872 404 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 MAP3K9P80192 1104 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 SREBF2Q12772 1141 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 UBE3CQ15386 1083 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 MAP3K11Q16584 847 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 MOB2Q70IA6 237 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 RASAL3Q86YV0 1011 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 DNAJC5GQ8N7S2 189 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 EDC3Q96F86 508 aaKnown RBP6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 TEPSINQ96N21 525 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 OSBPL5Q9H0X9 879 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 PICK1Q9NRD5 415 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 FAM198AQ9UFP1 575 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 RFX7Q2KHR2 1363 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 COL2A1P02458 1487 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 SSC5DA1L4H1 1573 aa6.51□□□□□ -1.37
HMGB1P40-201ENST00000525121 FLT1P17948 1338 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 ATRNL1Q5VV63 1379 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 TRIM6-TRIM34B2RNG4 842 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 RNF113AO15541 343 aaKnown RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 CA12O43570 354 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 MBD4O95243 580 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZBTB48P10074 688 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 DYNLL1P63167 89 aaKnown RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 LDLRAD1Q5T700 205 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 CENPQQ7L2Z9 268 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 MIGA2Q7L4E1 593 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 ADGRA1Q86SQ6 560 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 MAPKAPK5Q8IW41 473 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 JMYQ8N9B5 988 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 OTUD7AQ8TE49 926 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 APPBP2Q92624 585 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 EVI5LQ96CN4 794 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 CCDC136Q96JN2 1154 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 PI4KBQ9UBF8 816 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
HMGB1P40-201ENST00000525121 TCRBV5S4A2TA0A5A2 114 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 MANSC4A6NHS7 340 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 AOC2O75106 756 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 USP2O75604 605 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 POLR3DP05423 398 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 GNAT2P19087 354 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 MKRN3Q13064 507 aaKnown RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 VGLL4Q14135 290 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 SPRYD7Q5W111 196 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 OTUD7BQ6GQQ9 843 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 ERO1BQ86YB8 467 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 CDAN1Q8IWY9 1227 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 RILPL2Q969X0 211 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 OPTNQ96CV9 577 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 OTUD5Q96G74 571 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 ARMT1Q9H993 441 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 ELP3Q9H9T3 547 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 DDX4Q9NQI0 724 aaKnown RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 ATP8A2Q9NTI2 1148 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 SAP30BPQ9UHR5 308 aaKnown RBP6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 FZD1Q9UP38 647 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 SALL3Q9BXA9 1300 aa6.49□□□□□ -1.37
HMGB1P40-201ENST00000525121 MYH2Q9UKX2 1941 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 DDTLA6NHG4 134 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 SPDYE5A6NIY4 337 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 FAM155AB1AL88 458 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 HIP1O00291 1037 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 TBC1D12O60347 775 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 CTNND1O60716 968 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 APPP05067 770 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 HSPA1AP0DMV8 641 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 HSPA1BP0DMV9 641 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 TDO2P48775 406 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 MFAP1P55081 439 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 INHBEP58166 350 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 KIF23Q02241 960 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 NOL9Q5SY16 702 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 FOXP4Q8IVH2 680 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZFPM1Q8IX07 1006 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 SCYL3Q8IZE3 742 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 LCORLQ8N3X6 602 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 WNK4Q96J92 1243 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 CLMNQ96JQ2 1002 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 OSBPL3Q9H4L5 887 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 DIAPH3Q9NSV4 1193 aa6.48□□□□□ -1.37
HMGB1P40-201ENST00000525121 ARPP21Q9UBL0 812 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms