RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PTGS1P23219 599 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 CCDC129Q6ZRS4 1044 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 CDAN1Q8IWY9 1227 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 UBXN1Q04323 297 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 SPECC1LQ69YQ0 1117 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 PLIN2Q99541 437 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 USP40Q9NVE5 1235 aa18.27■□□□□ 0.51
PCDHA3-201ENST00000522353 TRAF5O00463 557 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 HARSP12081 509 aaKnown RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 GJC1P36383 396 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 OTUD6BQ8N6M0 293 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 DNM2P50570 870 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 ELP1O95163 1332 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 CTAGE15A4D2H0 777 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 POLR3GO15318 223 aaPredicted RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 STX10O60499 249 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 CTAGE8P0CG41 777 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 CTAGE6Q86UF2 777 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 CTAGE4Q8IX94 777 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 STX17P56962 302 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 KCNG1Q9UIX4 513 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 KIAA0232Q92628 1395 aa18.26■□□□□ 0.51
PCDHA3-201ENST00000522353 PZPP20742 1482 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 SLC27A2O14975 620 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 PIK3AP1Q6ZUJ8 805 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 ZNF532Q9HCE3 1301 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 DCAF17Q5H9S7 520 aaPredicted RBP18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 GINS2Q9Y248 185 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 M0QZ92 97 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 CNNM4Q6P4Q7 775 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 GSTA5Q7RTV2 222 aa18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 LUC7L2Q9Y383 392 aaKnown RBP18.25■□□□□ 0.51
PCDHA3-201ENST00000522353 ZAP70P43403 619 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 CCDC186Q7Z3E2 898 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 KIFAP3Q92845 792 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 CCNT1O60563 726 aaKnown RBP18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 SYT1P21579 422 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 CBX1P83916 185 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 KIAA1524Q8TCG1 905 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 HSF2BPO75031 334 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 SIK1P57059 783 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 PNMA2Q9UL42 364 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 RXRBP28702 533 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 TRPC3Q13507 836 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
PCDHA3-201ENST00000522353 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 SNX16P57768 344 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 TYRO3Q06418 890 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 TFAP4Q01664 338 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 DIS3L2Q8IYB7 885 aaKnown RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 ZSWIM4Q9H7M6 989 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 TXKP42681 527 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 CARD10Q9BWT7 1032 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 CFBP00751 764 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 ARL1P40616 181 aaPredicted RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 KIF22Q14807 665 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 SULF1Q8IWU6 871 aa18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 DHX37Q8IY37 1157 aaKnown RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 SRRTQ9BXP5 876 aaKnown RBP18.23■□□□□ 0.51
PCDHA3-201ENST00000522353 INSRP06213 1382 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 PDE4DQ08499 809 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 RAPGEF1Q13905 1077 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 NOX5Q96PH1 765 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 PLCD3Q8N3E9 789 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 CALCOCO1Q9P1Z2 691 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 DYNC1I1O14576 645 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 VWA3BQ502W6 1294 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 TTC38Q5R3I4 469 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 LRWD1Q9UFC0 647 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 CETN3O15182 167 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 SGSM2O43147 1006 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 ATP5JP18859 108 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 GOLGA1Q92805 767 aa18.22■□□□□ 0.51
PCDHA3-201ENST00000522353 PTPRTO14522 1441 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms