RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NID2Q14112 1375 aa30.2■■■□□ 2.43
COL13A1-214ENST00000522165 KLRG2A4D1S0 409 aaPredicted RBP30.2■■■□□ 2.43
COL13A1-214ENST00000522165 IGSF3O75054 1194 aa30.2■■■□□ 2.43
COL13A1-214ENST00000522165 BBOX1O75936 387 aa30.2■■■□□ 2.43
COL13A1-214ENST00000522165 PGBD1Q96JS3 809 aa30.2■■■□□ 2.43
COL13A1-214ENST00000522165 ZNF396Q96N95 335 aaPredicted RBP30.2■■■□□ 2.43
COL13A1-214ENST00000522165 MYL10Q9BUA6 226 aa30.2■■■□□ 2.43
COL13A1-214ENST00000522165 SMIM22K7EJ46 135 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 LIG1P18858 919 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 WTAPQ15007 396 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 NTRK3Q16288 839 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ZNF827Q17R98 1081 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 CTR9Q6PD62 1173 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ANP32BQ92688 251 aaKnown RBP30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ZKSCAN3Q9BRR0 538 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 CRNKL1Q9BZJ0 848 aaKnown RBP30.19■■■□□ 2.42
COL13A1-214ENST00000522165 RCOR1Q9UKL0 485 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ATP2B4P23634 1241 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 DZIP1Q86YF9 867 aaKnown RBP30.19■■■□□ 2.42
COL13A1-214ENST00000522165 CCDC144CPQ8IYA2 1237 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ESR2Q92731 530 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 CRAMP1Q96RY5 1269 aa30.19■■■□□ 2.42
COL13A1-214ENST00000522165 ERICH2A1L162 156 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 CCDC173Q0VFZ6 552 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 SYNE3Q6ZMZ3 975 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 TMTC2Q8N394 836 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 GPR101Q96P66 508 aaPredicted RBP30.18■■■□□ 2.42
COL13A1-214ENST00000522165 CYP2D7A0A087X1C5 515 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 AKT1S1Q96B36 256 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 USP28Q96RU2 1077 aa30.18■■■□□ 2.42
COL13A1-214ENST00000522165 KIAA1551Q9HCM1 1747 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 UFL1O94874 794 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 FGRP09769 529 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 PPP1R9BQ96SB3 815 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 GGA1Q9UJY5 639 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 DUOX1Q9NRD9 1551 aa30.17■■■□□ 2.42
COL13A1-214ENST00000522165 PCP11498 1178 aaKnown RBP30.16■■■□□ 2.42
COL13A1-214ENST00000522165 CEBPZQ03701 1054 aaKnown RBP30.16■■■□□ 2.42
COL13A1-214ENST00000522165 FTOQ9C0B1 505 aaKnown RBP eCLIP30.16■■■□□ 2.42
COL13A1-214ENST00000522165 DCP1AQ9NPI6 582 aaPredicted RBP30.16■■■□□ 2.42
COL13A1-214ENST00000522165 ATP8A2Q9NTI2 1148 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 USP17L12C9JPN9 530 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 USP17L21D6R901 530 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 APBA3O96018 575 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 LDHBP07195 334 aaKnown RBP30.16■■■□□ 2.42
COL13A1-214ENST00000522165 PHKBQ93100 1093 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 UBAC1Q9BSL1 405 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 GJB4Q9NTQ9 266 aa30.16■■■□□ 2.42
COL13A1-214ENST00000522165 RANBP6O60518 1105 aaKnown RBP30.15■■■□□ 2.42
COL13A1-214ENST00000522165 ALG1Q9BT22 464 aa30.15■■■□□ 2.42
COL13A1-214ENST00000522165 PODXL2Q9NZ53 605 aa30.15■■■□□ 2.42
COL13A1-214ENST00000522165 IARSP41252 1262 aaKnown RBP30.15■■■□□ 2.42
COL13A1-214ENST00000522165 RCAN1P53805 252 aa30.15■■■□□ 2.42
COL13A1-214ENST00000522165 RNF214Q8ND24 703 aa30.15■■■□□ 2.42
COL13A1-214ENST00000522165 SEC23AQ15436 765 aa30.14■■■□□ 2.42
COL13A1-214ENST00000522165 BRAPQ7Z569 592 aa30.14■■■□□ 2.42
COL13A1-214ENST00000522165 COL23A1Q86Y22 540 aaPredicted RBP30.14■■■□□ 2.42
COL13A1-214ENST00000522165 NLGN1Q8N2Q7 840 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 AIFM3Q96NN9 605 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 FUCA2Q9BTY2 467 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 CD209Q9NNX6 404 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 STK36Q9NRP7 1315 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 BICD2Q8TD16 824 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 NUP62CLQ9H1M0 184 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 DACT1Q9NYF0 836 aa30.13■■■□□ 2.41
COL13A1-214ENST00000522165 IFNAR1P17181 557 aa30.12■■■□□ 2.41
COL13A1-214ENST00000522165 KIF23Q02241 960 aaPredicted RBP30.12■■■□□ 2.41
COL13A1-214ENST00000522165 DDX19AQ9NUU7 478 aaKnown RBP30.12■■■□□ 2.41
COL13A1-214ENST00000522165 TNKSO95271 1327 aa30.12■■■□□ 2.41
COL13A1-214ENST00000522165 IL1R1P14778 569 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 RTN1Q16799 776 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 SBK1Q52WX2 424 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 RTEL1Q9NZ71 1219 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.11■■■□□ 2.41
COL13A1-214ENST00000522165 MYH2Q9UKX2 1941 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 LAMB1P07942 1786 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 ECM29Q5VYK3 1845 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 GSTO1P78417 241 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 TMC4Q7Z404 712 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 ZNF654Q8IZM8 581 aa30.11■■■□□ 2.41
COL13A1-214ENST00000522165 ARPP21Q9UBL0 812 aaPredicted RBP30.11■■■□□ 2.41
COL13A1-214ENST00000522165 ANKRD31Q8N7Z5 1873 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 KIF28PB7ZC32 967 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 FMNL1O95466 1100 aaPredicted RBP30.1■■■□□ 2.41
COL13A1-214ENST00000522165 SSRP1Q08945 709 aaKnown RBP30.1■■■□□ 2.41
COL13A1-214ENST00000522165 GRIK5Q16478 980 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 TBC1D16Q8TBP0 767 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 ZSCAN10Q96SZ4 725 aaPredicted RBP30.1■■■□□ 2.41
COL13A1-214ENST00000522165 POLLQ9UGP5 575 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 LRRC37AA6NMS7 1700 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 POLR3DP05423 398 aaPredicted RBP30.1■■■□□ 2.41
COL13A1-214ENST00000522165 SLC26A6Q9BXS9 759 aa30.1■■■□□ 2.41
COL13A1-214ENST00000522165 NRXN2Q9P2S2 1712 aa30.09■■■□□ 2.41
COL13A1-214ENST00000522165 ORC4O43929 436 aa30.09■■■□□ 2.41
COL13A1-214ENST00000522165 PRDM1O75626 825 aa30.09■■■□□ 2.41
COL13A1-214ENST00000522165 MYSM1Q5VVJ2 828 aa30.09■■■□□ 2.41
COL13A1-214ENST00000522165 KRT40Q6A162 431 aa30.09■■■□□ 2.41
COL13A1-214ENST00000522165 ENAHQ8N8S7 591 aaPredicted RBP30.09■■■□□ 2.41
COL13A1-214ENST00000522165 NR1I2O75469 434 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 EVX2Q03828 476 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 605.6 ms