RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 TCRBV5S4A2TA0A5A2 114 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 PDE6AP16499 860 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 UBE3CQ15386 1083 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 ZSCAN25Q6NSZ9 544 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.74■□□□□ 0.75
TNPO1-212ENST00000520850 SLC10A4Q96EP9 437 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 ZNF341Q9BYN7 854 aa19.74■□□□□ 0.75
TNPO1-212ENST00000520850 DHX36Q9H2U1 1008 aaKnown RBP19.74■□□□□ 0.75
TNPO1-212ENST00000520850 DDX4Q9NQI0 724 aaKnown RBP19.74■□□□□ 0.75
TNPO1-212ENST00000520850 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
TNPO1-212ENST00000520850 MX1P20591 662 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 NUCB1Q02818 461 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 PRKG1Q13976 671 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 ZFPM1Q8IX07 1006 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 TEX11Q8IYF3 940 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 PI4K2BQ8TCG2 481 aa19.73■□□□□ 0.75
TNPO1-212ENST00000520850 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
TNPO1-212ENST00000520850 CA12O43570 354 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 AOC2O75106 756 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 ADD2P35612 726 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 INHBEP58166 350 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.72■□□□□ 0.75
TNPO1-212ENST00000520850 SH3BP5LQ7L8J4 393 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 KBTBD3Q8NAB2 608 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 SH3RF3Q8TEJ3 882 aaPredicted RBP19.72■□□□□ 0.75
TNPO1-212ENST00000520850 CSRNP1Q96S65 589 aa19.72■□□□□ 0.75
TNPO1-212ENST00000520850 RIOK1Q9BRS2 568 aaKnown RBP19.72■□□□□ 0.75
TNPO1-212ENST00000520850 DDTLA6NHG4 134 aaPredicted RBP19.71■□□□□ 0.75
TNPO1-212ENST00000520850 TM4SF4P48230 202 aa19.71■□□□□ 0.75
TNPO1-212ENST00000520850 KIF23Q02241 960 aaPredicted RBP19.71■□□□□ 0.75
TNPO1-212ENST00000520850 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
TNPO1-212ENST00000520850 SPRYD7Q5W111 196 aa19.71■□□□□ 0.75
TNPO1-212ENST00000520850 METTL16Q86W50 562 aaKnown RBP19.71■□□□□ 0.75
TNPO1-212ENST00000520850 BCL11AQ9H165 835 aa19.71■□□□□ 0.75
TNPO1-212ENST00000520850 ZNF532Q9HCE3 1301 aa19.71■□□□□ 0.75
TNPO1-212ENST00000520850 CHD1LQ86WJ1 897 aa19.7■□□□□ 0.74
TNPO1-212ENST00000520850 FOXP4Q8IVH2 680 aaPredicted RBP19.7■□□□□ 0.74
TNPO1-212ENST00000520850 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
TNPO1-212ENST00000520850 PI4KBQ9UBF8 816 aa19.7■□□□□ 0.74
TNPO1-212ENST00000520850 FZD1Q9UP38 647 aa19.7■□□□□ 0.74
TNPO1-212ENST00000520850 CSADQ9Y600 493 aa19.7■□□□□ 0.74
TNPO1-212ENST00000520850 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 ZFYP08048 801 aaPredicted RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 HSPA1AP0DMV8 641 aaKnown RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 HSPA1BP0DMV9 641 aaKnown RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 PDE1AP54750 535 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 GRM1Q13255 1194 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 PICALMQ13492 652 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 NOL9Q5SY16 702 aaKnown RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 TGFBRAP1Q8WUH2 860 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 BEGAINQ9BUH8 593 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 OSBPL3Q9H4L5 887 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 HERC5Q9UII4 1024 aaKnown RBP19.69■□□□□ 0.74
TNPO1-212ENST00000520850 TAOK2Q9UL54 1235 aa19.69■□□□□ 0.74
TNPO1-212ENST00000520850 PHF20L1A8MW92 1017 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 DYNLL1P63167 89 aaKnown RBP19.68■□□□□ 0.74
TNPO1-212ENST00000520850 VGLL4Q14135 290 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 MIGA1Q8NAN2 632 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 OTUD7AQ8TE49 926 aaPredicted RBP19.68■□□□□ 0.74
TNPO1-212ENST00000520850 WNK4Q96J92 1243 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 CLMNQ96JQ2 1002 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 WRNIP1Q96S55 665 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 ZIC5Q96T25 663 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 SAGE1Q9NXZ1 904 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 FLT1P17948 1338 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
TNPO1-212ENST00000520850 FOCADQ5VW36 1801 aa19.67■□□□□ 0.74
TNPO1-212ENST00000520850 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
TNPO1-212ENST00000520850 MANSC4A6NHS7 340 aaPredicted RBP19.67■□□□□ 0.74
TNPO1-212ENST00000520850 SREBF2Q12772 1141 aa19.67■□□□□ 0.74
TNPO1-212ENST00000520850 ERO1BQ86YB8 467 aa19.67■□□□□ 0.74
TNPO1-212ENST00000520850 AIDAQ96BJ3 306 aa19.67■□□□□ 0.74
TNPO1-212ENST00000520850 LAMB1P07942 1786 aa19.66■□□□□ 0.74
TNPO1-212ENST00000520850 SPDYE5A6NIY4 337 aa19.66■□□□□ 0.74
TNPO1-212ENST00000520850 CTNND1O60716 968 aaKnown RBP19.66■□□□□ 0.74
TNPO1-212ENST00000520850 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
TNPO1-212ENST00000520850 PPATQ06203 517 aa19.66■□□□□ 0.74
TNPO1-212ENST00000520850 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
TNPO1-212ENST00000520850 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
TNPO1-212ENST00000520850 CDK5RAP2Q96SN8 1893 aa19.65■□□□□ 0.74
TNPO1-212ENST00000520850 RNF113AO15541 343 aaKnown RBP19.65■□□□□ 0.74
TNPO1-212ENST00000520850 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
TNPO1-212ENST00000520850 TSHZ3Q63HK5 1081 aa19.65■□□□□ 0.74
TNPO1-212ENST00000520850 EVI5LQ96CN4 794 aa19.65■□□□□ 0.74
TNPO1-212ENST00000520850 ATP8A2Q9NTI2 1148 aa19.65■□□□□ 0.74
TNPO1-212ENST00000520850 SNCAIPQ9Y6H5 919 aa19.65■□□□□ 0.74
TNPO1-212ENST00000520850 MYH7P12883 1935 aa19.64■□□□□ 0.74
TNPO1-212ENST00000520850 USP5P45974 858 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 B4GALNT3Q6L9W6 998 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 MAPKAPK5Q8IW41 473 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.73
TNPO1-212ENST00000520850 OPTNQ96CV9 577 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 EHD4Q9H223 541 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 GINM1Q9NU53 330 aa19.64■□□□□ 0.73
TNPO1-212ENST00000520850 OTOFQ9HC10 1997 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms