RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 HNRNPUQ00839 825 aaKnown RBP eCLIP3.81□□□□□ -1.8
CCNC-208ENST00000519617 PDE3BQ13370 1112 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 ORC1Q13415 861 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 TTLL4Q14679 1199 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 ANGEL2Q5VTE6 544 aaKnown RBP3.81□□□□□ -1.8
CCNC-208ENST00000519617 FAM214BQ7L5A3 538 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 CCDC74AQ96AQ1 378 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 CITED4Q96RK1 184 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 ZC3H12CQ9C0D7 883 aaKnown RBP3.81□□□□□ -1.8
CCNC-208ENST00000519617 FAM53CQ9NYF3 392 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 TRAK1Q9UPV9 953 aa3.81□□□□□ -1.8
CCNC-208ENST00000519617 NDUFB5O43674 189 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 RNGTTO60942 597 aaKnown RBP3.8□□□□□ -1.8
CCNC-208ENST00000519617 IGHA2P01877 340 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 NEFMP07197 916 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 HCLS1P14317 486 aaPredicted RBP3.8□□□□□ -1.8
CCNC-208ENST00000519617 ZNF157P51786 506 aaPredicted RBP3.8□□□□□ -1.8
CCNC-208ENST00000519617 ARHGAP4P98171 946 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 ZC3H12AQ5D1E8 599 aaKnown RBP3.8□□□□□ -1.8
CCNC-208ENST00000519617 ARHGAP27Q6ZUM4 889 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 PDZD3Q86UT5 571 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 CILP2Q8IUL8 1156 aa3.8□□□□□ -1.8
CCNC-208ENST00000519617 HEXIM2Q96MH2 286 aaKnown RBP3.8□□□□□ -1.8
CCNC-208ENST00000519617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCNC-208ENST00000519617 CARNS1A5YM72 827 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 ZNF503-AS2A6NEH8 195 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 ARID3CA6NKF2 412 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 IGF2BP3O00425 579 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCNC-208ENST00000519617 EIF1AYO14602 144 aaKnown RBP3.79□□□□□ -1.8
CCNC-208ENST00000519617 GADD45BO75293 160 aaPredicted RBP3.79□□□□□ -1.8
CCNC-208ENST00000519617 ERVK-24P63145 666 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 PPP2R3AQ06190 1150 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 GRM2Q14416 872 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 ZSWIM9Q86XI8 627 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 GLYCTKQ8IVS8 523 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCNC-208ENST00000519617 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 RNF214Q8ND24 703 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 ASB11Q8WXH4 323 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 ISL2Q96A47 359 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 TMEM39AQ9NV64 488 aa3.79□□□□□ -1.8
CCNC-208ENST00000519617 LRRC10BA6NIK2 292 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 H3BRB1 525 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 KCNB2Q92953 911 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 NIF3L1Q9GZT8 377 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 TUT1Q9H6E5 874 aaKnown RBP3.78□□□□□ -1.8
CCNC-208ENST00000519617 CACNA2D2Q9NY47 1150 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 GTF2IRD1Q9UHL9 959 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 CTNND2Q9UQB3 1225 aa3.78□□□□□ -1.8
CCNC-208ENST00000519617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.77□□□□□ -1.81
CCNC-208ENST00000519617 GPR182O15218 404 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 XRCC5P13010 732 aaKnown RBP3.77□□□□□ -1.81
CCNC-208ENST00000519617 ITIH2P19823 946 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 ARNTP27540 789 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 RAP1GAPP47736 663 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 SERPINB4P48594 390 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 KCNMB1Q16558 191 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 MLANAQ16655 118 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 NKPD1Q17RQ9 610 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 B4GALNT3Q6L9W6 998 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 DTHD1Q6ZMT9 781 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 SPACA3Q8IXA5 215 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 CCDC82Q8N4S0 544 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 STK35Q8TDR2 534 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 EPS8L3Q8TE67 593 aaKnown RBP3.77□□□□□ -1.81
CCNC-208ENST00000519617 TOX2Q96NM4 488 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 SSU72Q9NP77 194 aaKnown RBP3.77□□□□□ -1.81
CCNC-208ENST00000519617 PRDM7Q9NQW5 492 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 PPP4R2Q9NY27 417 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 LMCD1Q9NZU5 365 aa3.77□□□□□ -1.81
CCNC-208ENST00000519617 TSPAN15O95858 294 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 CFPP27918 469 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 AFMP43652 599 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 FCGRTP55899 365 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 ZP2Q05996 745 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 ZNF252P-AS1Q0IIN9 211 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 IKZF1Q13422 519 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 C1QL4Q86Z23 238 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 SULF2Q8IWU5 870 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 ALKBH8Q96BT7 664 aaKnown RBP3.76□□□□□ -1.81
CCNC-208ENST00000519617 CSRNP1Q96S65 589 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 PPP1R16BQ96T49 567 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 EMILIN2Q9BXX0 1053 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 PRDM10Q9NQV6 1147 aa3.76□□□□□ -1.81
CCNC-208ENST00000519617 GPN3Q9UHW5 284 aaPredicted RBP3.76□□□□□ -1.81
CCNC-208ENST00000519617 PITPNM2Q9BZ72 1349 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 NME2P22392 152 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 NTF4P34130 210 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 CLCN7P51798 805 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 RING1Q06587 406 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 FYB2Q5VWT5 728 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 SIAH1Q8IUQ4 282 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 GPBAR1Q8TDU6 330 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 LIN37Q96GY3 246 aaPredicted RBP3.75□□□□□ -1.81
CCNC-208ENST00000519617 DMRTB1Q96MA1 342 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 USTQ9Y2C2 406 aa3.75□□□□□ -1.81
CCNC-208ENST00000519617 FANCGO15287 622 aa3.74□□□□□ -1.81
CCNC-208ENST00000519617 EOMESO95936 686 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms