RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 KIF20AO95235 890 aa21.3■■□□□ 1
SDC2-202ENST00000518385 ZBTB7AO95365 584 aa21.3■■□□□ 1
SDC2-202ENST00000518385 HIBADHP31937 336 aaKnown RBP21.3■■□□□ 1
SDC2-202ENST00000518385 VPS37DQ86XT2 251 aa21.3■■□□□ 1
SDC2-202ENST00000518385 LRP2BPQ9P2M1 347 aa21.3■■□□□ 1
SDC2-202ENST00000518385 GGA1Q9UJY5 639 aa21.3■■□□□ 1
SDC2-202ENST00000518385 MRVI1Q9Y6F6 885 aa21.3■■□□□ 1
SDC2-202ENST00000518385 MYO5AQ9Y4I1 1855 aaKnown RBP21.3■■□□□ 1
SDC2-202ENST00000518385 TTC6Q86TZ1 520 aa21.29■■□□□ 1
SDC2-202ENST00000518385 TXNRD3Q86VQ6 643 aa21.29■■□□□ 1
SDC2-202ENST00000518385 MB21D2Q8IYB1 491 aaPredicted RBP21.29■■□□□ 1
SDC2-202ENST00000518385 SMARCC2Q8TAQ2 1214 aa21.29■■□□□ 1
SDC2-202ENST00000518385 CNKSR1Q969H4 720 aa21.29■■□□□ 1
SDC2-202ENST00000518385 NACAP1Q9BZK3 213 aa21.29■■□□□ 1
SDC2-202ENST00000518385 KCNF1Q9H3M0 494 aa21.29■■□□□ 1
SDC2-202ENST00000518385 LRRC37AA6NMS7 1700 aa21.29■■□□□ 1
SDC2-202ENST00000518385 CHRNA5P30532 468 aa21.28■■□□□ 1
SDC2-202ENST00000518385 SARM1Q6SZW1 724 aa21.28■■□□□ 1
SDC2-202ENST00000518385 PLA2G4DQ86XP0 818 aa21.28■■□□□ 1
SDC2-202ENST00000518385 ZNF830Q96NB3 372 aaPredicted RBP21.28■■□□□ 1
SDC2-202ENST00000518385 APPP05067 770 aa21.27■■□□□ 1
SDC2-202ENST00000518385 TBC1D16Q8TBP0 767 aa21.27■■□□□ 1
SDC2-202ENST00000518385 SPATA32Q96LK8 384 aa21.27■■□□□ 1
SDC2-202ENST00000518385 CFAP45Q9UL16 551 aa21.27■■□□□ 1
SDC2-202ENST00000518385 ATF5Q9Y2D1 282 aaPredicted RBP21.27■■□□□ 1
SDC2-202ENST00000518385 DHX16O60231 1041 aaKnown RBP21.27■□□□□ 0.99
SDC2-202ENST00000518385 UFL1O94874 794 aa21.27■□□□□ 0.99
SDC2-202ENST00000518385 IFNL3Q8IZI9 196 aa21.27■□□□□ 0.99
SDC2-202ENST00000518385 POLLQ9UGP5 575 aa21.27■□□□□ 0.99
SDC2-202ENST00000518385 PRC1O43663 620 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 MBD4O95243 580 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 POLD1P28340 1107 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 ZNF75DP51815 510 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 SCRN1Q12765 414 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 STK3Q13188 491 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 RGS22Q8NE09 1264 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 TMX4Q9H1E5 349 aaPredicted RBP21.26■□□□□ 0.99
SDC2-202ENST00000518385 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
SDC2-202ENST00000518385 IQSEC3Q9UPP2 1182 aaPredicted RBP21.26■□□□□ 0.99
SDC2-202ENST00000518385 A0A0G2JLW4 131 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 RIOK3O14730 519 aaKnown RBP21.25■□□□□ 0.99
SDC2-202ENST00000518385 PDIA3P30101 505 aaKnown RBP21.25■□□□□ 0.99
SDC2-202ENST00000518385 HAND2P61296 217 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 APOBRQ0VD83 1088 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 MPNDQ8N594 471 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 MTA3Q9BTC8 594 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 NAPBQ9H115 298 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 PYCARDQ9ULZ3 195 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 LTBP1Q14766 1721 aa21.25■□□□□ 0.99
SDC2-202ENST00000518385 KIF2AO00139 706 aaPredicted RBP21.24■□□□□ 0.99
SDC2-202ENST00000518385 FAM193AP78312 1265 aa21.24■□□□□ 0.99
SDC2-202ENST00000518385 TMEM87BQ96K49 555 aa21.24■□□□□ 0.99
SDC2-202ENST00000518385 LRRC2Q9BYS8 371 aa21.24■□□□□ 0.99
SDC2-202ENST00000518385 CBX8Q9HC52 389 aa21.24■□□□□ 0.99
SDC2-202ENST00000518385 KCND1Q9NSA2 647 aa21.24■□□□□ 0.99
SDC2-202ENST00000518385 CGNQ9P2M7 1197 aaKnown RBP21.24■□□□□ 0.99
SDC2-202ENST00000518385 GSG1L2A8MUP6 293 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 PLCB2Q00722 1185 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 PPP4R3BQ5MIZ7 849 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 ZNF804AQ7Z570 1209 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 LEO1Q8WVC0 666 aaPredicted RBP21.23■□□□□ 0.99
SDC2-202ENST00000518385 C7orf43Q8WVR3 580 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 MRFAP1L1Q96HT8 127 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 KIF13BQ9NQT8 1826 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 C6orf229H3BNL8 230 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 AP5Z1O43299 807 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 TUBB4AP04350 444 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 ZSCAN20P17040 1043 aaPredicted RBP21.23■□□□□ 0.99
SDC2-202ENST00000518385 CYP7A1P22680 504 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 NSUN7Q8NE18 718 aaKnown RBP21.23■□□□□ 0.99
SDC2-202ENST00000518385 GPR101Q96P66 508 aaPredicted RBP21.23■□□□□ 0.99
SDC2-202ENST00000518385 KRT23Q9C075 422 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 OGFRQ9NZT2 677 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 RAI14Q9P0K7 980 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 SLX4Q8IY92 1834 aa21.23■□□□□ 0.99
SDC2-202ENST00000518385 PSDA5PKW4 1024 aaPredicted RBP21.22■□□□□ 0.99
SDC2-202ENST00000518385 TAF3Q5VWG9 929 aa21.22■□□□□ 0.99
SDC2-202ENST00000518385 SPTY2D1Q68D10 685 aaPredicted RBP21.22■□□□□ 0.99
SDC2-202ENST00000518385 NAA16Q6N069 864 aaPredicted RBP21.22■□□□□ 0.99
SDC2-202ENST00000518385 DPP8Q6V1X1 898 aaPredicted RBP21.22■□□□□ 0.99
SDC2-202ENST00000518385 SGIP1Q9BQI5 828 aa21.22■□□□□ 0.99
SDC2-202ENST00000518385 ABCF2Q9UG63 623 aa21.22■□□□□ 0.99
SDC2-202ENST00000518385 SLC4A4Q9Y6R1 1079 aa21.22■□□□□ 0.99
SDC2-202ENST00000518385 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
SDC2-202ENST00000518385 TIAM2Q8IVF5 1701 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 MAGEB6P1A0A0J9YX57 407 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 KCNA3P22001 575 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 ANTXR2P58335 489 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 TGFB2P61812 414 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 ANO6Q4KMQ2 910 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 NBPF3Q9H094 633 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 RNF41Q9H4P4 317 aaPredicted RBP21.21■□□□□ 0.99
SDC2-202ENST00000518385 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
SDC2-202ENST00000518385 ANGEL1Q9UNK9 670 aaKnown RBP21.21■□□□□ 0.99
SDC2-202ENST00000518385 CACNA1SQ13698 1873 aa21.2■□□□□ 0.99
SDC2-202ENST00000518385 DPEP1P16444 411 aa21.2■□□□□ 0.98
SDC2-202ENST00000518385 LIG1P18858 919 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms