RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PLIN2Q99541 437 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 IMPG2Q9BZV3 1241 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 C6orf50Q9HD87 102 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 TMEM63CQ9P1W3 806 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 IL15P40933 162 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 ZNF131P52739 623 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 PAK2Q13177 524 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 SEPT14Q6ZU15 432 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 SMC1BQ8NDV3 1235 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 CAPN7Q9Y6W3 813 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 E7EVH7 732 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CASQ2O14958 399 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CALM1P0DP23 149 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CALM2P0DP24 149 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CALM3P0DP25 149 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 RXRAP19793 462 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 DCAF5Q96JK2 942 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 KCNH3Q9ULD8 1083 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 UTP11Q9Y3A2 253 aaKnown RBP14.87□□□□□ -0.03
TCOF1-214ENST00000515035 VWA3AA6NCI4 1184 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CLUL1Q15846 466 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-214ENST00000515035 TRIM31Q9BZY9 425 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 HLA-DOAP06340 250 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 ZNF853P0CG23 659 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 NBPF14Q5TI25 921 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
TCOF1-214ENST00000515035 KDM2BQ8NHM5 1336 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 BRD3Q15059 726 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 COPS6Q7L5N1 327 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 CROCCP2Q86T23 111 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 IP6K1Q92551 441 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 NYXQ9GZU5 481 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 PBRM1Q86U86 1689 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 RNF113AO15541 343 aaKnown RBP14.86□□□□□ -0.03
TCOF1-214ENST00000515035 PPFIA4O75335 1185 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 HSPA1LP34931 641 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 KRT9P35527 623 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 NOX5Q96PH1 765 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 LONRF3Q496Y0 759 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 TESK2Q96S53 571 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
TCOF1-214ENST00000515035 ZNF215Q9UL58 517 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-214ENST00000515035 FAM169AQ9Y6X4 670 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 SOS1Q07889 1333 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-214ENST00000515035 TRAF5O00463 557 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 GSTO1P78417 241 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 TAOK1Q7L7X3 1001 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 GDAP1L1Q96MZ0 367 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 NFE2L3Q9Y4A8 694 aa14.86□□□□□ -0.03
TCOF1-214ENST00000515035 PCDH11XQ9BZA7 1347 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 PCDH11YQ9BZA8 1340 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 SETSIPP0DME0 302 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 DCAF17Q5H9S7 520 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 MLKLQ8NB16 471 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 PER1O15534 1290 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 SPOPO43791 374 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 VAMP4O75379 141 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 PPP1R2P41236 205 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 SF3A3Q12874 501 aaKnown RBP eCLIP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 ARHGAP24Q8N264 748 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 TACO1Q9BSH4 297 aaKnown RBP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 SYNRGQ9UMZ2 1314 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 FAM13AO94988 1023 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 ZWINTO95229 277 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 SDCCAG8Q86SQ7 713 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 BANK1Q8NDB2 785 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 RTCBQ9Y3I0 505 aaKnown RBP14.85□□□□□ -0.03
TCOF1-214ENST00000515035 WHAMMP3Q1A5X7 153 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 KSR2Q6VAB6 950 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 PSMB7Q99436 277 aa14.85□□□□□ -0.03
TCOF1-214ENST00000515035 RPS6KB1P23443 525 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 MTX1Q13505 466 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 RNF10Q8N5U6 811 aaKnown RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 ERCC5P28715 1186 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 TNNI2P48788 182 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 NLRP12P59046 1061 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 KLHL7Q8IXQ5 586 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 GBP7Q8N8V2 638 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 RPL13P26373 211 aaKnown RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 GNGT1P63211 74 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 KRT71Q3SY84 523 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 MRRFQ96E11 262 aaKnown RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 IQSEC3Q9UPP2 1182 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-214ENST00000515035 SLC9C1Q4G0N8 1177 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 VPS52Q8N1B4 723 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
TCOF1-214ENST00000515035 SLF1Q9BQI6 1058 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms