RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 PNMA6AP0CW24 399 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CALM1P0DP23 149 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CALM2P0DP24 149 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CALM3P0DP25 149 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 MCM7P33993 719 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 PLCG2P16885 1265 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 KRT2P35908 639 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 TNNI2P48788 182 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 ZRSR2Q15696 482 aaKnown RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 B4GALNT4Q76KP1 1039 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CACTINQ8WUQ7 758 aaKnown RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 EXOC4Q96A65 974 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 CTIFO43310 598 aaKnown RBP14.83□□□□□ -0.04
TCOF1-213ENST00000514442 YEATS4O95619 227 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 TUBB2AQ13885 445 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 TUBB2BQ9BVA1 445 aa14.83□□□□□ -0.04
TCOF1-213ENST00000514442 KIF24Q5T7B8 1368 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 ZNF532Q9HCE3 1301 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 LEO1Q8WVC0 666 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 BAG1Q99933 345 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 BRD2P25440 801 aaKnown RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 CUL4AQ13619 759 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 PPP4R3AQ6IN85 833 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 N4BP3O15049 544 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 SEC31AO94979 1220 aaKnown RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 LRRC24Q50LG9 513 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 PLIN2Q99541 437 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 WDHD1O75717 1129 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-213ENST00000514442 SLFN14P0C7P3 912 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 CTSWP56202 376 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 LRCH2Q5VUJ6 765 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 EYA3Q99504 573 aa14.82□□□□□ -0.04
TCOF1-213ENST00000514442 EFCAB13Q8IY85 973 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 SEC62Q99442 399 aaKnown RBP14.81□□□□□ -0.04
TCOF1-213ENST00000514442 MMRN2Q9H8L6 949 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 PSDA5PKW4 1024 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-213ENST00000514442 FAM160A1Q05DH4 1040 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 DYDC1Q8WWB3 177 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 PYM1Q9BRP8 204 aaKnown RBP14.81□□□□□ -0.04
TCOF1-213ENST00000514442 C6orf50Q9HD87 102 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 BMP15O95972 392 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 CYP2C19P33261 490 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 ETF1P62495 437 aaKnown RBP14.81□□□□□ -0.04
TCOF1-213ENST00000514442 ZNF569Q5MCW4 686 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 CCDC121Q6ZUS5 278 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 FBXO18Q8NFZ0 1043 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 LZTFL1Q9NQ48 299 aa14.81□□□□□ -0.04
TCOF1-213ENST00000514442 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 RPAINQ86UA6 219 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 PAF1Q8N7H5 531 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 RSRC1Q96IZ7 334 aaKnown RBP14.8□□□□□ -0.04
TCOF1-213ENST00000514442 A0A1B0GVL5 298 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 SYCP3Q8IZU3 236 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 TMEM87AQ8NBN3 555 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 ATP5JP18859 108 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 MAGEA9P43362 315 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 ASIC1P78348 528 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 NAA25Q14CX7 972 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 PPP1R13BQ96KQ4 1090 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 SSH2Q76I76 1423 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 PTH1RQ03431 593 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 NAA30Q147X3 362 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-213ENST00000514442 EHBP1Q8NDI1 1231 aa14.8□□□□□ -0.04
TCOF1-213ENST00000514442 TBCAO75347 108 aaKnown RBP14.79□□□□□ -0.04
TCOF1-213ENST00000514442 CYP2E1P05181 493 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-213ENST00000514442 CCDC172P0C7W6 258 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 KIF2CQ99661 725 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 PAFAH1B1P43034 410 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 CLNS1AP54105 237 aaKnown RBP14.79□□□□□ -0.04
TCOF1-213ENST00000514442 CCDC114Q96M63 670 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 STX17P56962 302 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 TRPM1Q7Z4N2 1603 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 FAM182BQ5T319 152 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 FMNL3Q8IVF7 1028 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 PALD1Q9ULE6 856 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 ANGEL1Q9UNK9 670 aaKnown RBP14.79□□□□□ -0.04
TCOF1-213ENST00000514442 ERBB3P21860 1342 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 A2ML1A8K2U0 1454 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 CALML3P27482 149 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 ZNF174Q15697 407 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 MCTP2Q6DN12 878 aa14.79□□□□□ -0.04
TCOF1-213ENST00000514442 BRAPQ7Z569 592 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms