RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
SNHG4-208ENST00000514110 C17orf99Q6UX52 265 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 PI16Q6UXB8 463 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 HMG20BQ9P0W2 317 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 CPA4Q9UI42 421 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 MROH7-TTC4A0A0A0MT08 1334 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
SNHG4-208ENST00000514110 CTGFP29279 349 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 MAP3K10Q02779 954 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 PICALMQ13492 652 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 KIF22Q14807 665 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 GPAT2Q6NUI2 795 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 ZSCAN29Q8IWY8 852 aaPredicted RBP15.09■□□□□ 0.01
SNHG4-208ENST00000514110 TMEM57Q8N5G2 664 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 ADGRA2Q96PE1 1338 aa15.09■□□□□ 0.01
SNHG4-208ENST00000514110 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 RHBDL3P58872 404 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 NBPF11Q86T75 865 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 SCYL3Q8IZE3 742 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 SPATA5Q8NB90 893 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 TMEM106CQ9BVX2 250 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
SNHG4-208ENST00000514110 CXCL11O14625 94 aa15.07■□□□□ 0
SNHG4-208ENST00000514110 MYCP01106 439 aaPredicted RBP15.07■□□□□ 0
SNHG4-208ENST00000514110 PTPRAP18433 802 aa15.07■□□□□ 0
SNHG4-208ENST00000514110 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
SNHG4-208ENST00000514110 G3BP1Q13283 466 aaKnown RBP eCLIP15.07■□□□□ 0
SNHG4-208ENST00000514110 GORABQ5T7V8 394 aa15.07■□□□□ 0
SNHG4-208ENST00000514110 SH3TC2Q8TF17 1288 aa15.07■□□□□ 0
SNHG4-208ENST00000514110 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
SNHG4-208ENST00000514110 TRIM47Q96LD4 638 aa15.07■□□□□ 0
SNHG4-208ENST00000514110 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
SNHG4-208ENST00000514110 GNRH1P01148 92 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 CYP2C8P10632 490 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 MCAMP43121 646 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 PSMC4P43686 418 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
SNHG4-208ENST00000514110 PICK1Q9NRD5 415 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.06■□□□□ 0
SNHG4-208ENST00000514110 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
SNHG4-208ENST00000514110 BCRP11274 1271 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 POLA2Q14181 598 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 SLC4A8Q2Y0W8 1093 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 CCDC84Q86UT8 332 aaPredicted RBP15.05■□□□□ -0
SNHG4-208ENST00000514110 SRRDQ9UH36 339 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 PHIPQ8WWQ0 1821 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 DOCK1Q14185 1865 aa15.05■□□□□ -0
SNHG4-208ENST00000514110 KIAA0100Q14667 2235 aaKnown RBP15.04■□□□□ -0
SNHG4-208ENST00000514110 FAM196BA6NMK8 535 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 CTNND1O60716 968 aaKnown RBP15.04■□□□□ -0
SNHG4-208ENST00000514110 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
SNHG4-208ENST00000514110 LDHCP07864 332 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 OSBPP22059 807 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 PRMT2P55345 433 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 GSTO1P78417 241 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 FASTKD5Q7L8L6 764 aaKnown RBP15.04■□□□□ -0
SNHG4-208ENST00000514110 PARK7Q99497 189 aaKnown RBP15.04■□□□□ -0
SNHG4-208ENST00000514110 RAI14Q9P0K7 980 aa15.04■□□□□ -0
SNHG4-208ENST00000514110 TBC1D12O60347 775 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
SNHG4-208ENST00000514110 UQCRFS1P1P0C7P4 283 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
SNHG4-208ENST00000514110 TNNI3KQ59H18 835 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 SSH3Q8TE77 659 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 SNRKQ9NRH2 765 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 LRP2BPQ9P2M1 347 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 FPGT-TNNI3KV9GXZ4 949 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 PTPRFP10586 1907 aa15.03■□□□□ -0
SNHG4-208ENST00000514110 MYPNQ86TC9 1320 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 TRIM75PA6NK02 468 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 MAP4K4O95819 1239 aaPredicted RBP15.02■□□□□ -0
SNHG4-208ENST00000514110 ATP8B2P98198 1209 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 MTFR1Q15390 333 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 MIER1Q8N108 512 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 DBNDD2Q9BQY9 259 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 OSBPL5Q9H0X9 879 aaPredicted RBP15.02■□□□□ -0
SNHG4-208ENST00000514110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.02■□□□□ -0
SNHG4-208ENST00000514110 GPR108Q9NPR9 543 aa15.02■□□□□ -0
SNHG4-208ENST00000514110 COL2A1P02458 1487 aaPredicted RBP15.01□□□□□ -0.01
SNHG4-208ENST00000514110 RLBP1P12271 317 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 HOXD10P28358 340 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 PRKCZQ05513 592 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 OS9Q13438 667 aaPredicted RBP15.01□□□□□ -0.01
SNHG4-208ENST00000514110 RRP1BQ14684 758 aaKnown RBP15.01□□□□□ -0.01
SNHG4-208ENST00000514110 TTC39AQ5SRH9 613 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 TEX11Q8IYF3 940 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 RAET1EQ8TD07 263 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 SH3RF3Q8TEJ3 882 aaPredicted RBP15.01□□□□□ -0.01
SNHG4-208ENST00000514110 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 MGAMO43451 1857 aa15.01□□□□□ -0.01
SNHG4-208ENST00000514110 ZBTB7BO15156 539 aaPredicted RBP15□□□□□ -0.01
SNHG4-208ENST00000514110 SURF6O75683 361 aaKnown RBP15□□□□□ -0.01
SNHG4-208ENST00000514110 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
SNHG4-208ENST00000514110 GRK4P32298 578 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms