RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 LEO1Q8WVC0 666 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 ARHGEF1Q92888 912 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 DDX11Q96FC9 970 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 TMEM87BQ96K49 555 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 ANKRD2Q9GZV1 360 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 NAPBQ9H115 298 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 ARMT1Q9H993 441 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 DENND2AQ9ULE3 1009 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 ANGEL1Q9UNK9 670 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 CACNA1SQ13698 1873 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 SBF2Q86WG5 1849 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 CASZ1Q86V15 1759 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 STK36Q9NRP7 1315 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 PRKAB2O43741 272 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 IGSF3O75054 1194 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 APPP05067 770 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 CYP7A1P22680 504 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 KLRK1P26718 216 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 GTF2E1P29083 439 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 TM4SF1P30408 202 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 ADD1P35611 737 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 LIFRP42702 1097 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 RCAN1P53805 252 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 RPS8P62241 208 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 NFIXQ14938 502 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 CAVIN4Q5BKX8 364 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 SLC27A3Q5K4L6 730 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 ATL3Q6DD88 541 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 FAM173BQ6P4H8 233 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 APOA5Q6Q788 366 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 ADGRD1Q6QNK2 874 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 TPTE2Q6XPS3 522 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 FAM196AQ6ZSG2 479 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 ADGRA1Q86SQ6 560 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 CNBD1Q8NA66 436 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 FAM84BQ96KN1 310 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 SPATA32Q96LK8 384 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 NLRP3Q96P20 1036 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 RIOK1Q9BRS2 568 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 MTA3Q9BTC8 594 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 FUCA2Q9BTY2 467 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 NACAP1Q9BZK3 213 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 CNNM2Q9H8M5 875 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 LY9Q9HBG7 655 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 LRRC4BQ9NT99 713 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 DDX19AQ9NUU7 478 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 LRP2BPQ9P2M1 347 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 PCDHGA4Q9Y5G9 962 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 TACC3Q9Y6A5 838 aa5.58□□□□□ -1.52
PDLIM5-214ENST00000510099 MAGEB6P1A0A0J9YX57 407 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 WTIPA6NIX2 430 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 B4E1Z4 1266 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 CPLX1O14810 134 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 CDKL5O76039 1030 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 LIG1P18858 919 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 RFC4P35249 363 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 TDO2P48775 406 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 METAP2P50579 478 aaKnown RBP eCLIP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 CTDSPL2Q05D32 466 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 PPARAQ07869 468 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 GRAPQ13588 217 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 CRY2Q49AN0 593 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 AKNAD1Q5T1N1 836 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 TRAPPC3LQ5T215 181 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 C15orf52Q6ZUT6 534 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 VPS37DQ86XT2 251 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 MIGA1Q8NAN2 632 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 GRAPLQ8TC17 118 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 IGDCC4Q8TDY8 1250 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 ZNF384Q8TF68 577 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 ANP32BQ92688 251 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 C8orf76Q96K31 380 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 ZNF396Q96N95 335 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 BRIP1Q9BX63 1249 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 KRT23Q9C075 422 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 CLSTN2Q9H4D0 955 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 RNF41Q9H4P4 317 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 RAI14Q9P0K7 980 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 ORC3Q9UBD5 711 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 NAP1L2Q9ULW6 460 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 IQSEC3Q9UPP2 1182 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 SLC4A4Q9Y6R1 1079 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 UBR3Q6ZT12 1888 aa5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 MYO5AQ9Y4I1 1855 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-214ENST00000510099 XDHP47989 1333 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 GOLGA8AA7E2F4 631 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 ZBTB43O43298 467 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RANBP6O60518 1105 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 KDM4AO75164 1064 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 FGRP09769 529 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 PCP11498 1178 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 GYS1P13807 737 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 HIBADHP31937 336 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 FOSBP53539 338 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms