RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 NOL9Q5SY16 702 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 BRI3BPQ8WY22 251 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 ZBTB40Q9NUA8 1239 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 COL2A1P02458 1487 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 AK9Q5TCS8 1911 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 IGSF3O75054 1194 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 LDHCP07864 332 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 GSTO1P78417 241 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 PPIL2Q13356 520 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 TTC39AQ5SRH9 613 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 OTUD7BQ6GQQ9 843 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 ERC1Q8IUD2 1116 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
PDLIM5-209ENST00000506632 MYO5AQ9Y4I1 1855 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CCL15-CCL14A0A0B4J2E2 113 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 IRF6O14896 467 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 RGS19P49795 217 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 PPATQ06203 517 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CRHR2Q13324 411 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 PKN2Q16513 984 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CCL15Q16663 113 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 KCNH4Q9UQ05 1017 aa11.13□□□□□ -0.63
PDLIM5-209ENST00000506632 CETPP11597 493 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 ZAP70P43403 619 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 SNAPC2Q13487 334 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 ZCCHC17Q9NP64 241 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
PDLIM5-209ENST00000506632 BTBD19C9JJ37 291 aa11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 PPP4CP60510 307 aa11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 PICALMQ13492 652 aa11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 C20orf194Q5TEA3 1177 aa11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-209ENST00000506632 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 TBC1D12O60347 775 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 HMMRO75330 724 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 CAP1Q01518 475 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 MOGSQ13724 837 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 FBXO46Q6PJ61 603 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 OTOP1Q7RTM1 612 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 AACSQ86V21 672 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
PDLIM5-209ENST00000506632 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 CXCL11O14625 94 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 PLCG2P16885 1265 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 PTPRAP18433 802 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 SP3Q02447 781 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 IL1RAPL2Q9NP60 686 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 PTPRFP10586 1907 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 ADGRA2Q96PE1 1338 aa11.09□□□□□ -0.63
PDLIM5-209ENST00000506632 TLR2O60603 784 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 BAG3O95817 575 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 TMED8Q6PL24 325 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 CD99L2Q8TCZ2 262 aa11.08□□□□□ -0.64
PDLIM5-209ENST00000506632 NOL10Q9BSC4 688 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms