RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ENOX1Q8TC92 643 aaKnown RBP18.15■□□□□ 0.5
SCLT1-208ENST00000506368 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 E7EWF7 191 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 USP8P40818 1118 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 AARSP49588 968 aaKnown RBP eCLIP18.14■□□□□ 0.5
SCLT1-208ENST00000506368 DNAJC21Q5F1R6 531 aaKnown RBP18.14■□□□□ 0.5
SCLT1-208ENST00000506368 CCDC102BQ68D86 513 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 CCDC91Q7Z6B0 441 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 PACS2Q86VP3 889 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 MLKLQ8NB16 471 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 LRRC2Q9BYS8 371 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 FANCLQ9NW38 375 aa18.14■□□□□ 0.5
SCLT1-208ENST00000506368 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
SCLT1-208ENST00000506368 FOSBP53539 338 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 GUCY1B3Q02153 619 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
SCLT1-208ENST00000506368 CASP8Q14790 479 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 MAP9Q49MG5 647 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 MMS22LQ6ZRQ5 1243 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 RPAINQ86UA6 219 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 CCDC51Q96ER9 411 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 DBNLQ9UJU6 430 aaKnown RBP18.14■□□□□ 0.49
SCLT1-208ENST00000506368 FAN1Q9Y2M0 1017 aa18.14■□□□□ 0.49
SCLT1-208ENST00000506368 ZNF18P17022 549 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 GYS2P54840 703 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 CWF19L2Q2TBE0 894 aaKnown RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 TOGARAM2Q6ZUX3 1019 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 TTF2Q9UNY4 1162 aaKnown RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 KIF23Q02241 960 aaPredicted RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 VPS72Q15906 364 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 RESP18Q5W5W9 173 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.13■□□□□ 0.49
SCLT1-208ENST00000506368 ATRNO75882 1429 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 GLI3P10071 1580 aa18.13■□□□□ 0.49
SCLT1-208ENST00000506368 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE15A4D2H0 777 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE8P0CG41 777 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 LRRC31Q6UY01 552 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE6Q86UF2 777 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE4Q8IX94 777 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 PDILTQ8N807 584 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
SCLT1-208ENST00000506368 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
SCLT1-208ENST00000506368 ABCB6Q9NP58 842 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 INTS13Q9NVM9 706 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
SCLT1-208ENST00000506368 MCTP2Q6DN12 878 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 TADA2BQ86TJ2 420 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 CNNM3Q8NE01 707 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 DDX21Q9NR30 783 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 EP400Q96L91 3159 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 ZMYM1Q5SVZ6 1142 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 NT5DC1Q5TFE4 455 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 CCDC129Q6ZRS4 1044 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 AFAP1L1Q8TED9 768 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 ADGRG1Q9Y653 693 aa18.11■□□□□ 0.49
SCLT1-208ENST00000506368 DDX60Q8IY21 1712 aaKnown RBP18.11■□□□□ 0.49
SCLT1-208ENST00000506368 MROH7-TTC4A0A0A0MT08 1334 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
SCLT1-208ENST00000506368 AMOTQ4VCS5 1084 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 RASGRP2Q7LDG7 609 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 TACO1Q9BSH4 297 aaKnown RBP18.1■□□□□ 0.49
SCLT1-208ENST00000506368 CPLX1O14810 134 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 ERCC5P28715 1186 aaPredicted RBP18.1■□□□□ 0.49
SCLT1-208ENST00000506368 NR1I3Q14994 352 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
SCLT1-208ENST00000506368 A0A1B0GTH6 734 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 A6NNZ2 444 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 CDKL5O76039 1030 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 FECHP22830 423 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 KIF4BQ2VIQ3 1234 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 TUBB8Q3ZCM7 444 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 KANK3Q6NY19 840 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 RPGRIP1Q96KN7 1286 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 CTAGE1Q96RT6 745 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 PNKPQ96T60 521 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 GPR108Q9NPR9 543 aa18.09■□□□□ 0.49
SCLT1-208ENST00000506368 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.49
SCLT1-208ENST00000506368 SHC4Q6S5L8 630 aa18.08■□□□□ 0.49
SCLT1-208ENST00000506368 EDC3Q96F86 508 aaKnown RBP18.08■□□□□ 0.49
SCLT1-208ENST00000506368 NAPGQ99747 312 aaPredicted RBP18.08■□□□□ 0.49
SCLT1-208ENST00000506368 MRPL44Q9H9J2 332 aaKnown RBP18.08■□□□□ 0.49
SCLT1-208ENST00000506368 KDM6AO15550 1401 aaPredicted RBP18.08■□□□□ 0.49
SCLT1-208ENST00000506368 ANXA1P04083 346 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 PNOCQ13519 176 aa18.08■□□□□ 0.48
SCLT1-208ENST00000506368 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms