RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ANKRD24Q8TF21 1146 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 FRMD6Q96NE9 622 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 OSBPL1AQ9BXW6 950 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 ATXN3LQ9H3M9 355 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 ATG3Q9NT62 314 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 CTSHP09668 335 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 DAB2P98082 770 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 PSMD2Q13200 908 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 CCDC85BQ15834 202 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 PPM1JQ5JR12 505 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 ZNF765Q7L2R6 523 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 UBE3DQ7Z6J8 389 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 SMYD4Q8IYR2 804 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 ISL2Q96A47 359 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 PIM2Q9P1W9 311 aa6.21□□□□□ -1.42
HMGB1P29-201ENST00000505659 KIAA1324LA8MWY0 1029 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 TRIM37O94972 964 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 SPINK2P20155 84 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 CDK8P49336 464 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 C12orf40Q86WS4 652 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 GAL3ST3Q96A11 431 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 PCDHA4Q9UN74 947 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 LEMD3Q9Y2U8 911 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 SAMM50Q9Y512 469 aa6.2□□□□□ -1.42
HMGB1P29-201ENST00000505659 F6X3S4 739 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 NTF4P34130 210 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 SV2BQ7L1I2 683 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 NBPF11Q86T75 865 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 LRRC4CQ9HCJ2 640 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 PCDHB5Q9Y5E4 795 aa6.19□□□□□ -1.42
HMGB1P29-201ENST00000505659 LEFTY1O75610 366 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 FOSL1P15407 271 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 GRIK1P39086 918 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 ERVK-24P63145 666 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 XPCQ01831 940 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 SEPT6Q14141 434 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 INPP5AQ14642 412 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 LRRC14Q15048 493 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 LRFN4Q6PJG9 635 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 TMC4Q7Z404 712 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 GIMAP7Q8NHV1 300 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 U3KQE9 123 aa6.18□□□□□ -1.42
HMGB1P29-201ENST00000505659 FAM87AP0C7U9 286 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 FGD1P98174 961 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 HNRNPUQ00839 825 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 MSMPQ1L6U9 139 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 INTS5Q6P9B9 1019 aaKnown RBP6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 DTX1Q86Y01 620 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 RNF214Q8ND24 703 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 CYP8B1Q9UNU6 501 aa6.17□□□□□ -1.42
HMGB1P29-201ENST00000505659 CYP26A1O43174 497 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 LIG3P49916 1009 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 RING1Q06587 406 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 OGFOD3Q6PK18 319 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 FAM181AQ8N9Y4 354 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 PLPPR2Q96GM1 343 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 METTL22Q9BUU2 404 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 SSU72Q9NP77 194 aaKnown RBP6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 PICK1Q9NRD5 415 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
HMGB1P29-201ENST00000505659 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 RBAK-RBAKDNI3L0D1 243 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 TFE3P19532 575 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 WIPI1Q5MNZ9 446 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 ZBTB37Q5TC79 503 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 DUSP27Q5VZP5 1158 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 NFXL1Q6ZNB6 911 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 TOP6BLQ8N6T0 577 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 VTI1BQ9UEU0 232 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 ZC3H7BQ9UGR2 993 aaKnown RBP6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 PCOLCE2Q9UKZ9 415 aa6.15□□□□□ -1.42
HMGB1P29-201ENST00000505659 SORBS3O60504 671 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 TAF1CQ15572 869 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 CPSF6Q16630 551 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 AGMOQ6ZNB7 445 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 CRELD1Q96HD1 420 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 BCL2L13Q9BXK5 485 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 FBRSQ9HAH7 460 aa6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 OAS3Q9Y6K5 1087 aaKnown RBP6.14□□□□□ -1.43
HMGB1P29-201ENST00000505659 RPS26P62854 115 aaKnown RBP6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 CYP27A1Q02318 531 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 TMCO4Q5TGY1 634 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 HOMEZQ8IX15 550 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 MRS2Q9HD23 443 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
HMGB1P29-201ENST00000505659 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 FANCGO15287 622 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 ERCC3P19447 782 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 ST13P50502 369 aaKnown RBP6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 GP2P55259 537 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms