RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ANAPC4Q9UJX5 808 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 PCDHB10Q9UN67 800 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 WASF2Q9Y6W5 498 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 METTL12A8MUP2 240 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 VSTM5A8MXK1 200 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 POTEB2H3BUK9 544 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 PLD2O14939 933 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 TBX3O15119 743 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 RFPL3O75679 317 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 ARAFP10398 606 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZSCAN20P17040 1043 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 GUCY2CP25092 1073 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 GRIA4P48058 902 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 NEK3P51956 506 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 PTPN5P54829 565 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 TMPRSS15P98073 1019 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 SETDB1Q15047 1291 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRRC14Q15048 493 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 LONRF2Q1L5Z9 754 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 SV2CQ496J9 727 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 TJAP1Q5JTD0 557 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 FAM209AQ5JX71 171 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 KIAA1211LQ6NV74 962 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 NYAP1Q6ZVC0 841 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 HDGFL2Q7Z4V5 671 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCNJLQ8IV13 435 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 AHI1Q8N157 1196 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 PPM1KQ8N3J5 372 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 AFAP1L2Q8N4X5 818 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 PDILTQ8N807 584 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 C19orf47Q8N9M1 422 aaKnown RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 RBBP8NLQ8NC74 664 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 VPS37AQ8NEZ2 397 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 JPH3Q8WXH2 748 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 USP7Q93009 1102 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 CHMP4CQ96CF2 233 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 KCTD12Q96CX2 325 aaKnown RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF512BQ96KM6 892 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 CDH19Q9H159 772 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 ANTXR1Q9H6X2 564 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 NCOA5Q9HCD5 579 aaKnown RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 TMEM39AQ9NV64 488 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 PUF60Q9UHX1 559 aaKnown RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 TAGLN3Q9UI15 199 aa4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 MRPS23Q9Y3D9 190 aaKnown RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 GPC6Q9Y625 555 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P22-201ENST00000505315 DNAJC25-GNG10A0A024R161 153 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 TRBV23-1A0A0A0MS06 115 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAM221AA4D161 298 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 ADCY3O60266 1144 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 SUSD5O60279 629 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 CILPO75339 1184 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 RARAP10276 462 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 ACPPP15309 386 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 BDNFP23560 247 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 GGCXP38435 758 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 TRAPPC10P48553 1259 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 VEGFBP49765 207 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 HYAL2Q12891 473 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 NNTQ13423 1086 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 LRRFIP1Q32MZ4 808 aaKnown RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC10A6Q3KNW5 377 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 GNPTABQ3T906 1256 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAM102BQ5T8I3 360 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 FOXB2Q5VYV0 432 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 THSD4Q6ZMP0 1018 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 NECAB2Q7Z6G3 386 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 DGKHQ86XP1 1220 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 IFNL3Q8IZI9 196 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 KDF1Q8NAX2 398 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 TM9SF2Q99805 663 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 DHRS4Q9BTZ2 278 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZNF700Q9H0M5 742 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 POLMQ9NP87 494 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 BRD7Q9NPI1 651 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 LUC7LQ9NQ29 371 aaKnown RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 ENAMQ9NRM1 1142 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAP3K20Q9NYL2 800 aaKnown RBP4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 TRHDEQ9UKU6 1024 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAM50BQ9Y247 325 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC12A7Q9Y666 1083 aa4.58□□□□□ -1.68
HMGB1P22-201ENST00000505315 A0A096LPE4 126 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 A0A1W2PPZ6 126 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 POTEB3A0JP26 581 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 RASSF10A6NK89 507 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 PRPF3O43395 683 aaKnown RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 OPA1O60313 960 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 KPNA6O60684 536 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 MMP20O60882 483 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZIC2O95409 532 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 ALDH1A1P00352 501 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 F2P00734 622 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 PSAPP07602 524 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 SDSP20132 328 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 TARSP26639 723 aaKnown RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 TYRO3Q06418 890 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 STAT4Q14765 748 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms