RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MAP3K2Q9Y2U5 619 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 SUGT1Q9Y2Z0 365 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 AOX1Q06278 1338 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 RPAP1Q9BWH6 1393 aaPredicted RBP7.7□□□□□ -1.18
GYPB-204ENST00000504951 PI4KAP2A4QPH2 592 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 ADCY3O60266 1144 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 KCNJ4P48050 445 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 GNAI1P63096 354 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 CALD1Q05682 793 aaKnown RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 UBE4AQ14139 1066 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 RALBP1Q15311 655 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 NEUROD2Q15784 382 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 NOL9Q5SY16 702 aaKnown RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 DCAF15Q66K64 600 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
GYPB-204ENST00000504951 PLPP6Q8IY26 295 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 PI4KAP1Q8N8J0 262 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 JARID2Q92833 1246 aaPredicted RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 TMEM39BQ9GZU3 492 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 UNC93B1Q9H1C4 597 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 TDRD3Q9H7E2 651 aaKnown RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 GPHNQ9NQX3 736 aaPredicted RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 UNC80Q8N2C7 3258 aa7.69□□□□□ -1.18
GYPB-204ENST00000504951 SPTBN5Q9NRC6 3674 aaKnown RBP7.69□□□□□ -1.18
GYPB-204ENST00000504951 ANKRD18BA2A2Z9 1011 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 PDHXO00330 501 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 HRO43593 1189 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
GYPB-204ENST00000504951 TFRCP02786 760 aaKnown RBP7.68□□□□□ -1.18
GYPB-204ENST00000504951 BCAMP50895 628 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 RBM5P52756 815 aaKnown RBP eCLIP7.68□□□□□ -1.18
GYPB-204ENST00000504951 PRKCZQ05513 592 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 GCKRQ14397 625 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 MFSD14BQ5SR56 506 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 TBC1D22AQ8WUA7 517 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 ZDHHC15Q96MV8 337 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 PARK7Q99497 189 aaKnown RBP7.68□□□□□ -1.18
GYPB-204ENST00000504951 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
GYPB-204ENST00000504951 TTF2Q9UNY4 1162 aaKnown RBP7.68□□□□□ -1.18
GYPB-204ENST00000504951 COL2A1P02458 1487 aaPredicted RBP7.68□□□□□ -1.18
GYPB-204ENST00000504951 ARAP2Q8WZ64 1704 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 F8W031 263 aaPredicted RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 CRKP46108 304 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 FLT3LGP49771 235 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 MAP3K10Q02779 954 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 HHIPL2Q6UWX4 724 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 FASTKD5Q7L8L6 764 aaKnown RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 FBXO33Q7Z6M2 555 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 PAWRQ96IZ0 340 aaKnown RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 WRNIP1Q96S55 665 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 ZNF341Q9BYN7 854 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 BIN2Q9UBW5 565 aaPredicted RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 LAS1LQ9Y4W2 734 aaKnown RBP7.67□□□□□ -1.18
GYPB-204ENST00000504951 RPTORQ8N122 1335 aa7.67□□□□□ -1.18
GYPB-204ENST00000504951 VCANP13611 3396 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 TCP10L2B9ZVM9 353 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 TAF5LO75529 589 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 INHAP05111 366 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 HIBADHP31937 336 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 PSEN2P49810 448 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 FOXO4P98177 505 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 IFIT5Q13325 482 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 CWF19L2Q2TBE0 894 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 DMRTA1Q5VZB9 504 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 APOBEC3HQ6NTF7 200 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 Q7L0L9 218 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 HS6ST3Q8IZP7 471 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 LINS1Q8NG48 757 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 FAM151AQ8WW52 585 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 ZKSCAN4Q969J2 545 aaPredicted RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 FAM84BQ96KN1 310 aaPredicted RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 DEFB118Q96PH6 123 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 MYH16Q9H6N6 1097 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 RYDENQ9NUL5 291 aaKnown RBP7.66□□□□□ -1.18
GYPB-204ENST00000504951 OGDHLQ9ULD0 1010 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 GABRQQ9UN88 632 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 ZSWIM8A7E2V4 1837 aa7.66□□□□□ -1.18
GYPB-204ENST00000504951 A0A0G2JLL6 359 aaPredicted RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 SNAP23O00161 211 aa7.65□□□□□ -1.18
GYPB-204ENST00000504951 MAGEA10P43363 369 aaPredicted RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 PRRT2Q7Z6L0 340 aaPredicted RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
GYPB-204ENST00000504951 TEKT1Q969V4 418 aa7.65□□□□□ -1.18
GYPB-204ENST00000504951 GUCD1Q96NT3 240 aa7.65□□□□□ -1.18
GYPB-204ENST00000504951 MYBBP1AQ9BQG0 1328 aaKnown RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.18
GYPB-204ENST00000504951 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
GYPB-204ENST00000504951 TTC28Q96AY4 2481 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 ALPK3Q96L96 1907 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 MGAMO43451 1857 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 MAST3O60307 1309 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 KIF16BQ96L93 1317 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 COL6A1P12109 1028 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 DSG2Q14126 1118 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms